Bradyrhizobium symbiodeficiens: CIT39_10570
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Entry
CIT39_10570 CDS
T06284
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym01501
beta-Lactam resistance
bsym01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT39_10570
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT39_10570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsym03036
]
CIT39_10570
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_10570
01504 Antimicrobial resistance genes [BR:
bsym01504
]
CIT39_10570
Chromosome and associated proteins [BR:
bsym03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CIT39_10570
Transporters [BR:
bsym02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CIT39_10570
Antimicrobial resistance genes [BR:
bsym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT39_10570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
YqfD
Motif
Other DBs
NCBI-ProteinID:
AWM06847
LinkDB
All DBs
Position
2970835..2972106
Genome browser
AA seq
423 aa
AA seq
DB search
MSDVRAKTDDDEARDRPGAESLRVVELPSKGPRSRRRYGGALLGGGALLLLAGGLGIGAW
RHYEAARVVAAVAEQVRTNVPEVRVATVKPSGDIMKVSLPATTTAFEAANIFARTSGYIE
KRYVDIGDRVKKGDLLAEITAPELDQQIAQAQATLAQDQAALQQAQASRELADVTNSRDS
NLVKQGWLTAQQGDNDRLTLRAQQGAVGVAQSNITAQQAQIRVLQQEKSYQRVVAPFDGV
VTQRNVDNGSLVQAGSTFMFTLMHSNVIRTQVFVPQDEAFGVAPGVDAEIRVPEIPGRTF
AGKVTRIATALQPGSRTLLTEIDVPNPDGLLSPGIYCTVELSIPRRTPSMTIPSDALVFD
QNGLHVVVVRNGTVQFQQVSISRDFGTTVEVRDGVHPGDQVVLNPSVSLAEGSKVTVRKT
EVS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgttcgtgcaaagactgatgacgacgaggcgagagaccgcccgggggcagag
agcctccgggtcgtggagttgccgagcaagggtccgcgatcccgccggcgttacggcgga
gcattgctcggaggaggtgcgctcctgctgctcgccggcggtctcggcattggagcctgg
cggcactacgaggccgcgcgtgtcgttgccgcggtggcagagcaggtgcggaccaacgtt
ccggaagtgcgggtggcgacagtcaagcccagcggcgacatcatgaaggtgagtttgccg
gcgacgacgaccgcattcgaggcggccaacatcttcgcgcggaccagcggctatatcgag
aagcgctacgtcgatatcggtgatcgcgtcaagaagggcgacctccttgcggaaatcacc
gcgcccgagctggatcagcagatcgcgcaggcgcaggcgacgctggcgcaggaccaggcc
gcgcttcagcaggcgcaggcaagccgggagctcgccgacgtcaccaattcgcgcgacagc
aatctcgtcaagcagggctggttgacggcacaacagggcgacaatgatcgtctcaccctg
cgcgcgcagcaaggcgcggtgggggtcgcccaatcgaacatcactgcgcagcaggcgcag
atccgcgtcctccagcaggagaagtcgtaccagcgtgtggtggcgccgttcgacggtgtg
gtcacccagcgtaacgtggacaatggcagcctggtgcaggcaggctccaccttcatgttc
acgctgatgcattccaacgtgatccggacccaggtgttcgtgcctcaggacgaagcgttt
ggcgttgcgccgggcgtcgatgcggagatccgcgtccccgaaattccggggcggacgttt
gcgggcaaggtcacgcggatcgcaactgcgctgcagccggggagccggacgctgctgacc
gagatcgacgtgcccaaccccgatggcctgctcagtcccggcatttattgcaccgtcgaa
ctatcaatcccgcgcaggacgccatcgatgacgatcccctccgacgcgctcgtcttcgat
caaaacggccttcatgtcgtagtcgtgcggaacggcacggttcaatttcagcaggtctcg
atctccagagacttcggcaccacggtggaagtgcgcgacggtgtgcatcccggcgatcag
gtcgtgctcaatccttcggtcagcttggcagaaggcagcaaggtcaccgttcgcaagacc
gaagtcagctag
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