Bradyrhizobium symbiodeficiens: CIT39_26480
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Entry
CIT39_26480 CDS
T06284
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym01501
beta-Lactam resistance
bsym01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT39_26480
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT39_26480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_26480
01504 Antimicrobial resistance genes [BR:
bsym01504
]
CIT39_26480
Transporters [BR:
bsym02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CIT39_26480
Antimicrobial resistance genes [BR:
bsym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT39_26480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AWM09642
LinkDB
All DBs
Position
complement(6227216..6230377)
Genome browser
AA seq
1053 aa
AA seq
DB search
MASFFIDRPIFAWVVALFICLIGAIAVPLLPIAQYPIIAPPSISISTSYPGASPENLYNS
VTRLIEEELNGASGILNFESTSDSLGQVEIIANFQPGTNTNDASVEVQNRIKRVEARLPR
AVMQQGILIEEASSAVLQIITLSSTDGSLDEVGLGDFMIRNVLGEVRRIPGVGRATLYST
ERSLRVWVDPAKLVGYGLTADDVNKAIAAQNAQVASGSIGAEPSTSNQRTSALVLVKGQL
SAPDEFGAIILRANADGSTVRLRDVARIEVGGLSYQFNTRLNGKPTAGLSVLMSPTGNAL
ATASAVEEKMKELSRFFPANITYEIPYNITPVVEASIEKVLSTLVEAVVLVFVVMFLFLQ
NIRYTIIPTIVVPVALLGACTILLVAGYSINMLSMFGMVLAVGILVDDAIVVVENVERIM
AEEGLSPKEATRKAMSQITGAIIGITLVLMAVFVPMAFFPGSVGIIYRQFSVTMVAAIGF
SAFLALSLTPALCATLLKPVAKGHGHSTNFVFSRFNHLLEACRFRYARTVGFSLKRTGRM
MLVYVALLVGLSWAFVNLPGGFLPIDDQGFVTTDVQTPSDSSYARTESVIEKVEKYLAER
PGVKDVTFLTGFSFSGQGMNTAQAFITLKDWSERGPKDSAAAIVNDINRDLGASIRDAKI
AALQPPPIDNLGNSSGFSFRLQDRGQKGYQQLMRAADQLIVEANASPVLQKVYVEGLPEA
GVVNLVIDREKAGAFGVTFEDINNTISTNLGSNYINDFPNRGRMQRVVVQADARDRMRTE
DILNYNVKNRSGQLVPFSSFATVEWARGPTQIAGFNYYPAVRISGEARPGFTSGDAIAEM
ERLAGRLPRGFGYEWTGQSLQEKLSGSQAPFLLALSVFVVFLCLAALYESWTIPLAVLLT
VPLGIVGAVIAAMLRGLPNDVYFTVGLITIIGLAAKDAILIIEFAKDLRKEGKPLVDATI
EACRLRFRPILMTGLAFICGVLPMAVAHGAGGASQQALGSIVMGGMIAVVILALLMVPVF
FVSVQRVLAGDREPKAAREGEAYGPPAPVQSGH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttcttcatcgacaggccgatcttcgcctgggtggtcgcgctgttcatctgt
ctgatcggcgcgatcgcggtgccgttgctgccgatcgcgcaatatccgatcatcgcgccg
ccctcgatctcgatctccaccagctatcccggcgcttcgcccgaaaacctctacaacagc
gtcacgcggctgatcgaggaggagctcaacggcgcctccggcatcctcaatttcgaatcg
accagcgactcgctcggtcaggtcgaaatcatcgccaatttccagccaggcaccaatacc
aacgacgcctcggtggaggtccagaaccgcatcaagcgcgtcgaggcacgcctgccgcgc
gcggtgatgcaacagggcatcctgatcgaggaagcctccagcgcggtgcttcagatcatc
acgctcagctcgaccgacggcagcctcgatgaggtcggcctcggcgatttcatgatccgc
aacgtgctcggcgaagtccgccgcattcccggcgtcggccgcgccacgctctattcgacc
gagcgatcgcttcgcgtctgggtcgatccggccaagctggtcggctatgggctcaccgcc
gacgacgtcaacaaggccattgccgcgcaaaacgcgcaggtcgcctccggcagcatcggt
gccgagccgtcgacgtcgaaccagcgcacctccgcgctggtgctggtcaagggccagctg
tccgcgccggacgaattcggcgccatcatcctgcgcgccaatgccgacggctcgaccgtg
cggctgcgcgacgtcgcacgtatcgaggtcggtggtctcagctaccagttcaacacgcgc
ctgaacggcaagccgaccgccggcctttcggtgctgatgtcgccgaccggcaacgcgctg
gcgaccgcaagcgcggtcgaagagaagatgaaggagctgtcgcgcttcttcccggccaac
atcacctacgagattccctacaacatcacgcccgtggtcgaagcctcgatcgagaaggtg
ctgtcgacccttgtcgaggccgtggtgctggtgttcgtggtgatgttcctgttcctgcag
aacatccgttacaccatcatcccgaccatcgtggtgccggtggcgctgcttggcgcctgc
acgatactgctggtcgccggctattccatcaacatgctctcgatgttcggcatggtgctc
gcggtcggcatcctcgtcgacgacgccatcgtcgtggtcgagaacgtcgagcgcatcatg
gccgaggaaggcctgtcgccgaaggaggcgacgcgcaaggcgatgtcgcagatcaccggc
gccatcatcggcatcacgctggtgctgatggcggtgttcgtgccgatggcgttctttccg
ggatcggtcggcatcatctaccgccagttctccgtgaccatggtcgccgcgatcggcttc
tccgccttcctcgcgctgtcgctgacgccggcgctatgcgccacgctgttgaagcccgtt
gccaaggggcacggccattcgacaaattttgtgttcagccggttcaatcatctgctcgag
gcctgccggtttcgctacgcccgcaccgtcggcttctcgctgaaacggaccgggcgcatg
atgctggtctatgtcgcgctgctcgtcggcctgtcctgggctttcgtcaacctgcccggc
ggcttcctgccgatcgacgaccagggtttcgtcaccaccgacgtgcagacgccgtcggat
tcgtcctacgcccgtaccgaatccgtgatcgagaaggtcgagaaatatctcgccgaacgt
ccgggcgtgaaggatgtcaccttcctcaccggcttcagcttttccggccagggcatgaac
accgcgcaggccttcatcacgctgaaggactggtcggagcgcggaccgaaggattccgct
gcggccatcgtcaacgacatcaaccgcgatctgggggcgtcgatccgcgacgccaagatc
gccgcgctgcagccgccgccgatcgacaatctcggcaactcctcgggcttctcgttccgc
ctccaggatcgcggccagaagggctatcagcaattgatgcgcgccgccgaccaattgatc
gtggaagccaatgcgagcccggtgctgcagaaggtctatgtcgagggcctgccggaggcg
ggcgtggtcaatctcgtgatcgaccgcgagaaggccggcgccttcggcgtcaccttcgag
gacatcaacaacacgatctcgaccaatctcggctcgaactacatcaacgacttcccgaac
cgcggccgcatgcagcgcgtcgtggtgcaggccgacgcccgcgaccgcatgcggaccgag
gacatcctcaactacaacgtcaagaacagaagcggccaactcgtgccgttctcctccttt
gccacggtcgaatgggcgcgtgggccaacgcagatcgcgggcttcaactattatccggcg
gtacgcatctccggcgaggccaggcccggcttcacctcgggcgacgcgatcgccgagatg
gagcgtcttgccggcaggctgccgcgcggcttcggttatgaatggaccggccagtcgctg
caggaaaagctgtcgggttcgcaggcgccgttcctgctggcgctgtcggtgttcgtggtg
ttcctgtgtctcgccgcgctctacgaaagctggaccattccgctcgcggtgctgctcacg
gtgccgctcggcatcgtcggcgccgtgatcgcagccatgctgcgcggcctgcccaacgac
gtctatttcaccgtcggtctgatcaccatcatcggccttgcggccaaggacgcgatcctg
atcatcgaattcgccaaggatctgcggaaagaaggcaagccgctggtggacgccaccatc
gaggcctgccgtttgcgcttccgcccgatcctgatgaccggcctcgccttcatctgcggc
gtgctgccgatggccgtcgcccacggcgccggcggcgccagccagcaggcgctcggctcc
atcgtgatgggtggcatgatcgcagtggtgatcctggcgctcttgatggtgccggtgttc
ttcgtctcggtgcagcgtgtgctggcgggggatcgggagccgaaggcggcgagggaaggc
gaggcatacggcccgccggcgccagtgcagtctggccactga
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