Bradyrhizobium symbiodeficiens: CIT39_26485
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Entry
CIT39_26485 CDS
T06284
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym01501
beta-Lactam resistance
bsym01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT39_26485
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT39_26485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsym03036
]
CIT39_26485
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_26485
01504 Antimicrobial resistance genes [BR:
bsym01504
]
CIT39_26485
Chromosome and associated proteins [BR:
bsym03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CIT39_26485
Transporters [BR:
bsym02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CIT39_26485
Antimicrobial resistance genes [BR:
bsym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT39_26485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AWM09643
UniProt:
A0A6G9AEP5
LinkDB
All DBs
Position
complement(6230384..6231574)
Genome browser
AA seq
396 aa
AA seq
DB search
MSPLHARSVCVAMMLAVAAPLLAACDESNSAIVQAQPTEPDVSVVTVRPQPRSIVRELPG
RIAPTRVSDVRPRISGIVVERLFHQGSEVKAGDPLYRIDPRPFEVEVSANQAALAKAEAA
LMQAKQQAHRIATLTSQRAAPEAENEKAIAAELQAQAEVEGRKADLARAKLNLDYATVRA
PIDGVVGAALVSEGALAVQNETNLATIQQLDPIYADFTQSVNELNQLRRAFASGDLERIA
PGAAKVRLVLDDNTIYPLTGKLLFSDAKVDANTGQVTLRGEFPNLHRELLPGMYVRVRIE
QGIDSDAIAVPQQAVQRNGGGGSEVFVVKDDHRVAVQPVRTGSVQDGVWFITEGLKSGDK
VVVEGFQRFAAGDKVKPQSWAEAEAIVESQRAQMMQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccactacatgcgcgatccgtctgcgtggccatgatgctcgcggtcgcggcgccg
ctgcttgcggcctgtgatgaatcaaactctgcgatcgtccaggcgcaaccgaccgaaccc
gacgtcagcgtcgtgaccgtcaggccgcagccacgctccatcgtgcgggaactgcctgga
cgcatcgcgccgacgcgcgtctccgacgttcggccgcgcatctcgggcatcgtggtcgag
cgcctgttccaccagggcagcgaagtgaaggcgggcgatccgctttaccgcatcgatccg
cgtccgttcgaggtcgaggtgtcggcaaaccaggccgcgcttgccaaggcggaggctgcg
ctgatgcaggccaagcagcaggcgcaccgcatcgccacgctcaccagccagcgcgccgcg
cccgaggcggagaacgagaaggcaatcgctgccgagctccaggctcaagccgaggtcgag
ggccgcaaggcggatctcgcgcgtgcgaagctcaatctcgactacgccaccgtgcgtgcg
ccgatcgacggtgtcgtcggcgccgcgttggtcagcgagggcgctctcgccgtgcagaac
gagaccaatctcgcgaccattcagcagctcgatccgatctacgccgacttcacccaatcg
gtgaacgagctcaatcagctccgccgcgccttcgcgagcggggacctcgagcgcattgcg
cccggtgccgccaaggtgcgtctcgtgctcgacgacaacacgatctacccgctgaccggc
aaactcctgttctccgatgcgaaggtcgacgccaataccgggcaagtgacattgcgcggt
gaatttcccaatttgcaccgcgaattgctgcccggcatgtatgttcgggtacggatcgag
cagggcatcgacagcgacgcgatcgccgtgccgcagcaggcggttcagcgcaatggcggc
ggcggcagtgaagtcttcgtcgtgaaggacgatcaccgcgtcgcggtgcagcccgtgcgc
accggctcggtgcaggacggcgtctggttcatcaccgagggcctgaagtccggcgacaag
gtcgtcgtggaaggcttccagaggttcgcggcgggcgacaaggtcaagccgcaatcctgg
gccgaggccgaagccatcgtggaaagtcaacgcgcccagatgatgcagtag
DBGET
integrated database retrieval system
