Bradyrhizobium symbiodeficiens: CIT39_32215
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Entry
CIT39_32215 CDS
T06284
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00020
Citrate cycle (TCA cycle)
bsym00785
Lipoic acid metabolism
bsym01100
Metabolic pathways
bsym01110
Biosynthesis of secondary metabolites
bsym01120
Microbial metabolism in diverse environments
bsym01200
Carbon metabolism
bsym01210
2-Oxocarboxylic acid metabolism
Module
bsym_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bsym_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIT39_32215
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CIT39_32215
Enzymes [BR:
bsym01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CIT39_32215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AWM10653
LinkDB
All DBs
Position
385683..388664
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AA seq
993 aa
AA seq
DB search
MSRQDANAAFALSSFLQGTNATYIDEIYARYEKDPSSVDAEWQEFFKSLNDQPADVRKNA
AGPSWERANWPLTPQDDLTSALDGNWAEVEKAIGAKIAAKAQAKGGDKGGDKGAGLSSAD
LLQATRDSVRALMLIRAYRMRGHFHAKLDPLGIEAPRNREELDPRTYGFSEADFDRKIFL
DHVLGLEYGSLREITAICERTYCQTLGVEFMHISNAAQKAWIQERIEGPDKEISFTREGR
RAILMKLVEAEGFEKFCDTKFTGTKRFGLDGAESLIPALEQIIKRGGNLGVKEIVLGMPH
RGRLNVLTQVMGKAHRALFHEFKGGSANPDAVEGSGDVKYHLGASSDREFDGNRIHLSLT
ANPSHLEIVDPVVLGKVRAKQDQHGDPPDMRISVMPLLMHGDAAFAGQGVVAECFGLSDL
KGYRTGGSVHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKV
ATEFRQKFHKPVVIDMFCYRRHGHNEGDEPAFTQPVMYKKIAAHPSTLELYARRLISEGV
LTEGEVEKAKADWRARLDAELEAGSGYKPNKADWLDGKWAGFKIADQEEDARRGVTGVDI
ATLKDIGRKITKVPDGFRVHRTIQRFLENRAKAIDGNAGIDWATGEALAFCTLLNENHHV
RLSGQDSERGTFSQRHSVLIDQEDESRYTPFNHLGNEQGHYEVINSLLSEEAVLGFEYGY
SLAEPNTLTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSS
ARLERFLQMCAEDNMQVVYPTTPANYFHVLRRQLHREIRKPLILMTPKSLLRHKRAVSRI
EELAKGTTFHRILYDDAQMLPSEAIKLVPDEKIRRVVLCTGKVYYDLYEEREKRGIDDIY
LMRVEQLYPVPLKALVAELSRFKKAEVVWCQEEPRNMGAWHFIEPYLEWVLNQVNGASRR
PRYVGRAASAATATGLMSKHQAQLKAFLDEALS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaggacgcgaacgcagcctttgccttgtcctcctttttgcagggcaccaac
gccacctacatcgacgaaatctacgcccgctacgagaaggacccgtcctcggtcgacgcc
gagtggcaggagttcttcaagagcctgaacgaccagccggccgacgtccggaagaacgcc
gcgggcccgtcctgggagcgcgccaactggccgctgaccccgcaggacgatctcacctcc
gccctcgacggcaattgggctgaagtcgagaaggcaatcggtgccaagattgccgccaag
gcgcaggccaagggaggcgataagggtggcgacaagggcgccggcctctcctccgccgac
ctgctccaggcgacgcgcgattccgtccgcgccctgatgctgatccgcgcctaccgcatg
cgaggtcacttccacgccaagctcgacccgctcggcatcgaagctccccgcaaccgcgaa
gagctcgatccgcgtacctacggcttcagcgaagccgatttcgaccgcaagatattcctc
gaccacgtgctcggtctcgaatacggcagcctgcgcgagatcaccgcgatctgcgagcgc
acctactgccagacgctcggcgtcgagttcatgcacatcagcaacgccgcgcagaaggcc
tggatccaggagcgcatcgagggtccggacaaggagatctccttcacccgcgaaggccgc
cgcgccatcctgatgaagctggtcgaggccgagggttttgaaaaattctgcgacaccaag
ttcaccggtaccaagcgcttcggtctcgacggcgccgaatcgctgatccccgcgcttgag
cagatcatcaagcgcggcggcaatctcggcgtgaaggagatcgtgctgggcatgccgcat
cgcggccgcctcaacgtgctcacgcaggtgatgggaaaggcgcatcgcgccctgttccac
gagttcaagggcggctcggccaatcccgacgcggtcgaaggctccggcgacgtcaaatat
caccttggcgcgtcctcggaccgcgagttcgacggcaaccgcatccatctgtcgctgacc
gccaacccctcgcatctcgagatcgtcgatcccgtcgtgctcggcaaggtgcgcgcgaag
caggaccagcacggcgatcccccggacatgcgcatctccgtgatgccgctcttgatgcac
ggcgacgccgcgttcgccggccagggcgtggtcgccgagtgcttcggtctgtccgacctg
aagggctaccgcaccggcggctccgtgcacttcatcgtcaacaaccagatcggcttcacc
acctatccgcgttactcgcgctcctcgccctatccgtcggatgtggcgaagatgatcgac
gcgccgatcttccacgtcaacggcgacgatccggaagccgtcgtgttcgcggccaaggtc
gcgaccgagttccggcagaaattccacaagcccgtcgtcatcgacatgttctgctatcgc
aggcatggccacaacgaaggcgacgagccggctttcacccagccggtgatgtacaagaag
atcgcggcccatccgtccacgctcgaactctatgcccgccgcctcatcagcgaaggcgtg
ctgaccgagggcgaggtcgagaaagccaaggcggactggcgcgcgcggctcgatgccgaa
ctcgaagccggctccggctacaagccgaacaaggccgactggctcgacggcaagtgggcg
ggcttcaagatcgccgatcaggaagaggacgcgcgacgcggtgtcaccggcgtcgacatc
gccacgctgaaggacatcggccgcaagatcaccaaggtgccggatggtttccgcgtccac
cgcaccatccagcgcttcctggaaaaccgcgccaaggcgatcgacggcaacgcaggcatc
gactgggcgaccggcgaggcgctggcgttctgcacgctgctcaacgagaaccaccatgtc
cgcctgtccggccaggattccgagcgcggcaccttctcgcagcgtcactcggtcctgatc
gaccaggaagacgagagccgctacacgccgttcaaccatctcggcaacgagcagggccat
tacgaggtcatcaactcgctgctgtctgaagaagccgtgctcggcttcgaatacggctac
tcgctcgctgagccgaacacgctgaccctctgggaagcccagttcggcgacttcgccaac
ggcgcgcaggtcgtgttcgaccagttcatctcctcgggcgagcgcaaatggctgcgcatg
tccggcctcgtctgcctcttgccgcacggctatgagggccagggaccggagcattcctcg
gcgcgtctggagcgtttcctgcagatgtgcgccgaagacaacatgcaggtggtctacccg
accacgccggcgaactacttccacgtgctgcgccggcagctccatcgggagatccgcaag
ccgctgatcctgatgacgccgaagtcgctgctgcgtcacaagcgggcggtgtcgcgcatc
gaggagctcgcgaagggaacgacgttccaccgcatcctctatgatgacgcccagatgctg
ccgagcgaggcgatcaagctcgttccggacgagaagatccgccgcgtcgtgctgtgcacc
ggcaaggtctattacgacctctacgaggagcgcgagaagcgcggcatcgacgacatctac
ttgatgcgcgtcgagcagctctatccggtgccgttgaaggcgctggtggccgagctgtcg
cgcttcaagaaggccgaagtggtgtggtgccaggaagagccccgcaacatgggtgcctgg
cacttcatcgagccctatctggaatgggtgctgaaccaggtgaacggcgcgagccggcgt
ccgcgttatgtcggccgcgccgcttccgccgcgaccgccacgggtctgatgtccaagcat
caggcgcagttgaaggcgttcctggacgaagcactgagctga
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