Bradyrhizobium symbiodeficiens: CIT39_32670
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Entry
CIT39_32670 CDS
T06284
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym01501
beta-Lactam resistance
bsym01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT39_32670
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT39_32670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_32670
01504 Antimicrobial resistance genes [BR:
bsym01504
]
CIT39_32670
Transporters [BR:
bsym02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CIT39_32670
Antimicrobial resistance genes [BR:
bsym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT39_32670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AWM10734
UniProt:
A0ABX5WDK6
LinkDB
All DBs
Position
complement(492502..495651)
Genome browser
AA seq
1049 aa
AA seq
DB search
MALNISAWSIRNPLPSVVFSIILLVLGWVSFTKLAVTRLPSADIPVISVVVSQFGAAPAE
LESQVTKTVEDAVSGVEGVRHITSQITDGVSVTTIQFALETNTDRALNDVKDAVTRVRSN
LPQNVTEPLIQRVDVIGLPIVTYAAISPGKTPEQLSYFVDDVVKRALQGVRGVAQVERIG
GVEREILVSLDPDRLQAMGLTAVNVSQSLRGTNVDVAGGRAEIGKNDQAIRTLAGAKTLS
DLAGTMIPLFGGGEVRLDDLGTVTDTIADRRTFARFNGEPIVALGIKRSKGASDVKVAEA
VQKRVDALKAAYPDVDLKVIDTSVEYTNGNYHAAISTLFEGAILAVIIVLLFLRDLRATI
IAAISLPLSIFPAFWAMDLLGFSLNLVSFLAITLSTGILVDDAIVEIENIVRHMNMGKSP
YRAALEAADEIGLAVIAISLTIIAIFAPASFMSGIAGQFFKQFGITVSVQVFFSLLAARF
VTPVLAAYFLKHHTHEEPPPGRILRSYHRLVAWSVKHYFITVLIGFGVFAASIWSITLLP
QGFLPAQDSARSLLALELPPGTQLAYTEKVTEDIVARLRKRPEVKSIFVDGGRVPPGTQE
VRRAALIINYTPKDARDITQRELEFSISQELENIPDIRFWFLDENGLRAISLVVTGVDAN
IVNNFASELATQMKRIPTISNVISETTLERPELRVEPRADLAARLGVSTESLSQTIRVAT
IGDVGPALAKFDVGDRLVPIRVQLEDAARGNLKTLEQLRVPLGEHGEKGGVPLSVIADVK
LDQGPTSINRYDRERQATVAADLVGSAALGDATKKIYDLPVMKSRPKGVKVSPSGDAESL
NELSDGFATAITAGLMMVYAVLVLLFGTFLQPITILFSLPLSIGGAIAALLLTGKQLTTP
VWIGILMLMGIVTKNAIMLVEFAIEAIHAGKPREEAMIDAGMKRARPIVMTTIAMAAGMM
PSALAVGAGGEFRSPMALAVIGGLIFSTILSLVFVPAMFMVMDDLGALIWRFAKRLIVHS
EDAEADAHHGSAPAEAGPAPKNIIHPAAE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaatatctcggcatggtcgatccgtaatccgctgccgtcggtcgtcttctcg
atcatcctcctggttctcggctgggtgtccttcaccaagctcgccgtgacgcggctgccg
tcggccgacattcccgtgatctcggtcgtggtctcgcaattcggcgctgcgcccgccgaa
ctcgaatcgcaggtcaccaagacggtcgaagacgccgtctccggcgtcgagggcgtgcgg
cacatcacctcacagatcaccgacggcgtgtcggtgaccacgatccagttcgcgctggag
accaacaccgaccgcgccctcaacgacgtcaaggacgcggtgacgcgcgtgcgctccaac
ctgccgcagaacgtcaccgagccgctgatccagcgcgtcgacgtcatcggcctgccgatc
gtcacctatgccgcgatctcgcccggcaagacgccggagcagctctcctatttcgtcgac
gacgtggtcaagcgcgccctgcaaggcgtccgcggcgttgcccaggtcgagcgcatcggc
ggtgtcgagcgcgagatcctggtctcgctcgatcccgatcgcctgcaggcgatgggcctg
actgccgtcaatgtcagccagagcctgcgcggcaccaatgtcgacgtcgccggcggccgc
gccgagatcggcaagaacgaccaggcgatccgcacgctcgccggcgccaagacgctcagc
gacctcgccggcaccatgatcccgctgttcggcggcggcgaggtccggctcgacgatctc
ggcaccgtcaccgacaccatcgccgaccgccgcaccttcgcccgcttcaacggcgagccc
atcgtcgcgctcggcatcaagcgctccaagggcgccagcgacgtgaaggtggccgaggcc
gtgcagaagcgcgtcgacgcgctcaaggccgcctatcccgacgtcgacctcaaggtgatc
gacacctcggtcgaatacaccaacggcaattaccacgcggcgatctcgaccctgttcgag
ggcgccatcctcgccgtcatcatcgtgctgctgttcctgcgcgacctgcgcgcgaccatc
attgccgcgatctcgctgcccctgtcgatcttcccggcgttctgggcgatggacctgctc
ggcttctcgctcaacctcgtcagcttcctcgccatcacgctgtcgacaggtattctcgtc
gacgacgccatcgtcgagatcgagaacatcgtccggcacatgaacatgggcaaatcgccc
tatcgcgccgccctcgaagccgccgacgagatcggcctcgcggtgatcgcgatctcgctg
acgatcatcgcgatcttcgcacccgcaagtttcatgtcgggcatcgccggacagttcttc
aagcagttcggcatcaccgtctcggtgcaggtgttcttctcgctgctcgccgcgcgcttc
gtcacgccggtgctggcggcctacttcctcaaacaccatacgcacgaggagccgccgccc
ggccgcatattgcggtcctatcaccggctcgtggcctggtcggtgaagcattatttcatc
acggtgctgatcggcttcggcgtgttcgccgcctcgatctggagcatcacgctgctgccg
cagggattcctgccggcgcaggacagcgcacgctcgctgctggcgctcgagctgcctccg
ggcactcagctcgcctacaccgaaaaagtcaccgaggacatcgtcgcacgcctgcgcaag
cggcccgaggtgaagagcatcttcgtcgacggcggacgtgtcccgccgggcacgcaggag
gtccggcgcgccgcgctgatcatcaactacacgcccaaggatgcccgcgacatcacccag
cgcgagctcgaattctcgatcagccaggaattggagaacatccccgacatccgcttctgg
ttcctggacgagaacggcctgcgcgccatctcgctggtcgtgacaggtgtcgacgccaac
atcgtcaacaatttcgcgagcgagctcgcgacgcagatgaagcgcattcccaccatctcc
aacgtgatctcggaaaccacgctggagcggccggagctgcgcgtcgaaccgcgcgccgat
ctcgccgcgcggctcggcgtctcgaccgaaagcctgtcgcagaccatccgcgtcgccacc
atcggcgacgtcggacccgcgctcgccaagttcgacgtcggcgaccgtctggtgccgatc
cgcgtgcagctcgaggatgccgcgcgcggcaatctgaagacgctggaacagttgcgcgtg
ccgctcggcgagcacggcgagaagggcggcgtgccgctctcggtcatcgccgacgtcaag
ctcgaccagggtccgaccagcatcaaccggtatgatcgcgagcggcaggcgaccgtcgcc
gccgacctcgtcggttccgctgcgctcggcgacgccaccaagaagatctacgacctgccg
gtgatgaagagccggccgaagggcgtgaaggtctctccctccggcgacgccgaaagcctc
aacgagctgtccgacggcttcgccaccgcgatcacggcgggcctgatgatggtctacgcc
gtgctggtgctgctgttcggcaccttcctgcagccgatcaccatcctgttctcgctaccg
ctctcgatcggcggcgccatcgcggccctgctcctcaccggcaagcagctgaccacgccg
gtgtggatcggcatcctgatgctgatgggcatcgtcaccaagaacgcgattatgctggtg
gaattcgcgattgaagcgattcacgccggcaagccccgcgaagaggccatgatcgacgcc
ggcatgaagcgcgcccgcccgatcgtgatgaccaccatcgcaatggccgcgggcatgatg
ccgagcgcgctcgcggtcggcgccggcggcgagttccgctcgccgatggcgctcgcagtg
atcggcggcctgatcttctcgaccatcctgtcactggtgttcgtgcccgcgatgttcatg
gtgatggacgatctcggcgccctgatctggcgcttcgccaagcggctgatcgtgcacagc
gaggatgcggaggcggacgctcatcacggatcggcaccggcggaagcagggccagcgccg
aagaatatcatccaccccgctgcggagtga
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