Bos taurus (cow): 504760
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Entry
504760 CDS
T01008
Symbol
RIGI
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
bta
Bos taurus (cow)
Pathway
bta04064
NF-kappa B signaling pathway
bta04622
RIG-I-like receptor signaling pathway
bta04623
Cytosolic DNA-sensing pathway
bta05160
Hepatitis C
bta05161
Hepatitis B
bta05162
Measles
bta05164
Influenza A
bta05168
Herpes simplex virus 1 infection
bta05169
Epstein-Barr virus infection
bta05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
504760 (RIGI)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
504760 (RIGI)
04623 Cytosolic DNA-sensing pathway
504760 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
504760 (RIGI)
05160 Hepatitis C
504760 (RIGI)
05171 Coronavirus disease - COVID-19
504760 (RIGI)
05164 Influenza A
504760 (RIGI)
05162 Measles
504760 (RIGI)
05168 Herpes simplex virus 1 infection
504760 (RIGI)
05169 Epstein-Barr virus infection
504760 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bta04054
]
504760 (RIGI)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
504760 (RIGI)
Pattern recognition receptors [BR:
bta04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
504760 (RIGI)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
CCDC85
Motif
Other DBs
NCBI-GeneID:
504760
NCBI-ProteinID:
XP_002689526
BGD-bta:
BT11559
Ensembl:
ENSBTAG00000003366
VGNC:
27979
LinkDB
All DBs
Position
8:11523963..11605030
Genome browser
AA seq
942 aa
AA seq
DB search
MTAEQRRNLHAFRDYVRKILDPTYILSYMTPWFRDDVVQHIQAKKNNKGPMEAASLFLQV
LLELQEEGWFRGFLDALQQAGYSGLYEAIESWDFQKLEKLEEYRLLLKRLQPEFKTTINP
EDILPEISGCLLNQECEEIIQISSNKGLMAGAEKMVECLLRSDKENWPKTLKLALEKEES
KFSELWMVEKGAENVQMKDLEDDEMKTLDVHIVYKEEPESQNLSQNSCSSEVPPTYSPLK
PRNYQLELALPAQKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGRKGKVVVFAVQVPL
YEQQKSVFSEYFERFGYKVSGISGETADNISVEQIVENNDIIILTPQILVNSLKDGTIPS
LSIFTLMIFDECHNTNKHHPYNMIMFHYLDQKLGGSSDSLPQVIGLTASVGVGDAKNTAE
ATEYICKLCASLDTAVVTTVRDNLEELEEVVYKPQKFFRKVESRTTDRFKRIISQLMAET
EALAKSIFEELGTVTLENLSRIQNRNFGTQKYEQWIIAVQKACMVFQMPDKEEESRICKA
LFLYTSHLRKYNDALIINEDARMKDALNYLKNFFKNVRAAGFDAIEQDLTQRFEEKLLEL
EGISMDPSNENAKLKDLCFILQEEYHLNPETRTILFVKTRALVDALKNWIEENPKLSFLK
PGILTGRGRTNQTMGMTLPAQKCALDAFRTNRDSKILIATSVADEGIDIAQCNLVILYEY
VGNVIKMIQTRGRGRARGSKCFLLTSNADVIEKEKLNICQEKMMNESISRLQGWNEAVFK
EKIRQIQIQEKLIRDSQGKVKPVVDKKNKKLLCGKCKTFACYTADIRVVEECHFTVVRDA
FRECFVTKLHPRPKKFGSFDKKAKIFCARKDCLHDWGIHMKYKTFEIPVIKIESFVVEDV
ATGAQTLYAKWKDFNFEKIPFDAAEMSPWAQDLNLQGVDGLE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagagcagcggcggaatttgcacgccttccgcgactatgtcaggaagatcctg
gaccctacctacatcctgagctacatgaccccctggtttagggacgatgtggtgcagcac
attcaggccaagaaaaacaacaaggggcccatggaggctgcctcccttttcctccaggtc
ctactggagctccaggaggaaggctggttccgcggctttttggatgcccttcaacaagca
ggttattctggactttatgaagccattgaaagttgggatttccaaaaacttgaaaaattg
gaggagtatagattacttttaaagcgtttacaaccagaatttaaaaccacaatcaatcca
gaagatatccttcctgaaatatctggatgtttacttaatcaagaatgtgaagaaattatt
cagataagttccaacaaggggctgatggcaggtgcagagaaaatggttgaatgccttctc
agatcagacaaggagaactggcccaaaactttgaaacttgcattggagaaagaagagagc
aagttcagcgaactgtggatggtagagaaaggtgcagaaaatgttcaaatgaaagatctt
gaggatgatgaaatgaaaactttggatgtacacattgtctacaaagaagaaccagaaagc
cagaatcttagccagaattcctgttcttcagaagtgcctcctacttatagcccattgaaa
ccaagaaattaccaactagagctggctttacctgctcagaagggaaagaatacaataata
tgtgctcctactggttgtggaaaaacctttgtttcccttcttatatgcgaacatcatctt
aagaaatttccacaaggacgaaagggaaaagttgtcgtttttgctgttcaagtcccactg
tatgaacagcagaaatctgtgttctcagaatattttgaaagatttgggtacaaagtttca
ggcatttctggagagacagctgacaatatctctgtggaacagattgttgagaacaatgac
atcatcattttaacaccacagattcttgtgaacagccttaaagatgggactattccatca
ctctccatctttactttgatgatatttgatgaatgtcacaacaccaataaacaccatcca
tataatatgatcatgtttcattatctggatcagaaactgggaggatcttcagactcattg
ccccaggtcattgggctgactgcctcagttggcgttggagatgccaaaaacacagccgaa
gccacagaatatatctgcaaactgtgtgcttctctcgacacagcagtggtaacaacagtc
agagacaacttggaggaactggaggaggttgtttacaagccccagaagtttttcaggaaa
gtggaatcacggactacagacagatttaaacgcatcatatctcagctgatggcagagaca
gaggctctagcaaagagtatctttgaagaacttgggactgtaactcttgaaaacttatct
cgaattcaaaataggaattttgggacacagaaatatgaacagtggattattgcagttcag
aaagcatgcatggtgtttcagatgccagacaaagaggaagaaagcaggatttgtaaagcc
ctgtttttgtacacgtcacatttgcggaaatacaatgatgccctcattatcaatgaggat
gcacggatgaaagatgctctgaattacttgaaaaacttcttcaaaaatgtccgggcagca
ggatttgatgcaattgagcaagatctcactcagagatttgaagaaaagctgttggaacta
gaaggtatttccatggatcccagcaatgagaacgctaaactcaaagatctctgcttcatc
ttgcaagaggaataccacttaaacccagagaccagaaccatcctctttgtgaaaacccga
gcactggtggatgccttaaagaactggattgaagaaaatcctaaactcagctttctaaaa
cctggcatattgactggacgtggcagaacaaatcagacaatgggaatgacgctcccagca
cagaagtgtgcactggatgcattccgaaccaacagagacagcaagattctaattgctacc
tcggtcgccgatgaaggcattgacattgctcagtgcaatctggtcatcctctacgagtat
gtgggcaatgtcatcaaaatgatccagaccagaggcagaggaagagcaagagggagcaag
tgcttccttctgactagtaatgctgatgtaatcgaaaaagaaaaactgaacatctgccaa
gaaaaaatgatgaatgagtccatttcaaggctgcagggatggaatgaagcagtatttaag
gaaaagattcgccagatacagattcaagaaaaattaatcagggatagtcaaggaaaagta
aaacctgttgttgataagaaaaataaaaagctgctctgtggaaagtgcaaaacctttgca
tgttacacagctgatataagagtggtggaggaatgccatttcactgtggttagagatgct
ttcagggagtgcttcgtgactaagttacaccccagaccgaagaagtttgggagttttgac
aagaaagctaagatcttctgtgccaggaaggattgcctccatgactggggaattcacatg
aagtacaagacattcgagattccagttataaagatcgaaagttttgtggtggaagatgtt
gcgactggagctcagacactgtatgcaaagtggaaggactttaattttgagaagatccca
tttgatgctgcagaaatgtccccttgggctcaggacctcaatctgcagggagtggatggc
cttgaatga
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