Bos taurus (cow): 509425
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Entry
509425 CDS
T01008
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bta
Bos taurus (cow)
Pathway
bta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
509425 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bta03041
]
509425 (EFTUD2)
Spliceosome [BR:
bta03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
509425 (EFTUD2)
Complex C
U5 SnRNP specific factors
509425 (EFTUD2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
509425
NCBI-ProteinID:
NP_001076865
BGD-bta:
BT26407
Ensembl:
ENSBTAG00000013526
VGNC:
28364
UniProt:
A4FUD3
LinkDB
All DBs
Position
19:complement(44567288..44603628)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEVDEDEDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDSLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgacgagtttgggaattacatcggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgaggtcgatgaggatgag
gacgacgatgatgtgggcgatcacgacgaagaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccaccgccgaggaggtgtacggccccgaggtggagaccata
gttcaggaggaggacacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacgttacctgtcacggtgtacgaaatggattccttggca
gatctgatggataactcggagctcatcagaaatgtgactctctgtggccatctgcaccac
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagaacaagagaggggtgttggc
atcaaaagtactcctgtgacagtggtcttgccagataccaaggggaaatcctacctcttc
aacatcatggacactccaggacacgtgaatttttctgatgaggtcacagcgggcttgcgc
atctcagatggagtggtccttttcatcgatgccgctgagggcgtgatgctgaacacagag
cggctgattaagcacgcagtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgccacccacggatgcttactataagctgcgtcac
attgtcgatgaagtcaacggcttaataagcatgtactccacggatgagaacctgatcctt
tccccgctcctgggcaatgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacaccttcggtgacattaattaccaggagttcgct
aaaagactctggggtgacatctacttcaaccctaagacgcggaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagttttgtggagtttatcttggagcccctctataagatc
ctcgcccaggtcgtgggtgatgtggacaccagcctcccgaggaccctggatgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtttgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccgtct
ccaaaggtgggcgccaagcctaaaatcgagcacacctataccggtggtgtggactctgac
cttggcgaggccatgagtgactgtgaccccgacggtcccctgatgtgccacacgaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggccgagtgctaagtggcacc
atccatgctgggcagcctgtgaaggtactgggggagaactacaccctggaggatgaggaa
gactcccaaatatgcaccgtgggccgcctttggatctccgtggccaggtaccacatcgaa
gtgaaccgtgttcctgctggcaactgggtcctgatcgaaggtgtcgatcaaccaattgtg
aagacagcaaccataaccgaaccccgaggcaacgaggaggctcagatcttccggcccttg
aagttcaacaccacatctgttatcaagattgccgtggagccagtcaatccctctgagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagttacccgtccctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcactggagagctctacctggactgcgtg
atgcacgatttgcggaagatgtactcggagatcgacatcaaggtggctgaccctgttgtc
acattctgtgagacggtggtggaaacgtcgtccctcaagtgtttcgccgaaactcccaat
aagaagaacaaaatcaccatgatcgccgagcctctggagaagggccttgcagaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttctttcagacc
aagtatgactgggatctgctggctgcccgttccatctgggctttcggcccagatgccact
ggccccaacatcctggtggacgataccctgccctcggaggtggacaaggctcttctcggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcggaatgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggtgggggccagatcatccccacagcccggagagtcgtctactcagccttc
ctcatggccacccctcgtctgatggagccctactacttcgtcgaggtccaggcccccgca
gattgtgtctctgctgtctacacggtcctggccaggcgcaggggacacgtgactcaggat
gcacccatcccaggctctcctctgtacaccatcaaagctttcattccagccatcgactct
ttcggctttgagactgatctgcgaactcacacgcagggccaggccttttccttgtctgtc
ttccaccactggcagattgtacccggtgaccctctggacaagagcattgtcatccgcccc
ttggagccacagccagctccccacctggcccgagaattcatgatcaaaacccgtcgtaga
aagggcctgagtgaggatgtgagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgtggtgctcaactaccccatgtga
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