KEGG   Bos taurus (cow): 520500
Entry
520500            CDS       T01008                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
bta  Bos taurus (cow)
Pathway
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    520500 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bta03041]
    520500 (SMNDC1)
Spliceosome [BR:bta03041]
 Complex A
  U2 snRNP components
   U2 related factors
    520500 (SMNDC1)
 Complex B
    520500 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    520500 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 520500
NCBI-ProteinID: NP_001030414
BGD-bta: BT20923
Ensembl: ENSBTAG00000000551
VGNC: 35024
UniProt: Q3T045
LinkDB
Position
26
AA seq 238 aa
MPEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgccagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgag
gctgcgctgtctggaaatggagaaaatgaagatttactaaaattaaagaaagatttacaa
gaggttattgaactaaccaaagaccttctgtcaactcagccttctgaaactctggcaagt
tcagacaactttgcttctactcagcccactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaggaa
aacggcaccgctgcaatcacttttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcacagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtaaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaagggccaggtaaagaggagtatttttgct
tcacccgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacctctaaatacaatgttaggcatttgatgcctcaataa

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