Bos taurus (cow): 539124 Help Entry 539124            CDS       T01008                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism bta  Bos taurus (cow) Pathway bta04010   MAPK signaling pathway bta04064   NF-kappa B signaling pathway bta04120   Ubiquitin mediated proteolysis bta04140   Autophagy - animal bta04144   Endocytosis bta04380   Osteoclast differentiation bta04620   Toll-like receptor signaling pathway bta04621   NOD-like receptor signaling pathway bta04622   RIG-I-like receptor signaling pathway bta04657   IL-17 signaling pathway bta04722   Neurotrophin signaling pathway bta04936   Alcoholic liver disease bta05132   Salmonella infection bta05133   Pertussis bta05135   Yersinia infection bta05140   Leishmaniasis bta05142   Chagas disease bta05145   Toxoplasmosis bta05152   Tuberculosis bta05160   Hepatitis C bta05161   Hepatitis B bta05162   Measles bta05168   Herpes simplex virus 1 infection bta05169   Epstein-Barr virus infection bta05170   Human immunodeficiency virus 1 infection bta05171   Coronavirus disease - COVID-19 bta05200   Pathways in cancer bta05222   Small cell lung cancer bta05235   PD-L1 expression and PD-1 checkpoint pathway in cancer bta05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:bta00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     539124 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     539124 (TRAF6)    04064 NF-kappa B signaling pathway     539124 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     539124 (TRAF6)    04140 Autophagy - animal     539124 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     539124 (TRAF6)    04621 NOD-like receptor signaling pathway     539124 (TRAF6)    04622 RIG-I-like receptor signaling pathway     539124 (TRAF6)    04657 IL-17 signaling pathway     539124 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     539124 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     539124 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     539124 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     539124 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     539124 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     539124 (TRAF6)    05161 Hepatitis B     539124 (TRAF6)    05160 Hepatitis C     539124 (TRAF6)    05171 Coronavirus disease - COVID-19     539124 (TRAF6)    05162 Measles     539124 (TRAF6)    05168 Herpes simplex virus 1 infection     539124 (TRAF6)    05169 Epstein-Barr virus infection     539124 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     539124 (TRAF6)    05135 Yersinia infection     539124 (TRAF6)    05133 Pertussis     539124 (TRAF6)    05152 Tuberculosis     539124 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     539124 (TRAF6)    05140 Leishmaniasis     539124 (TRAF6)    05142 Chagas disease     539124 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     539124 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     539124 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bta04131]     539124 (TRAF6)    04121 Ubiquitin system [BR:bta04121]     539124 (TRAF6) Enzymes [BR:bta01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      539124 (TRAF6) Membrane trafficking [BR:bta04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     539124 (TRAF6) Ubiquitin system [BR:bta04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     539124 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF SlyX TRAF3_RING RING_XB3-XBAT31 zf-RING_11 Med21 U-box Spc29 DUF16 PspA_IM30 DUF3450 DUF4455 ATG16 DUF7607 DUF7310 CENP-Q DUF1664 Motif Other DBs NCBI-GeneID:  539124 NCBI-ProteinID:  NP_001029833 BGD-bta:  BT11909 Ensembl:  ENSBTAG00000036009 VGNC:  36278 UniProt:  Q3ZCC3 LinkDB All DBs Position 15:complement(66946442..66967539) Genome browser AA seq 542 aa AA seqDB search MSLLHCENSCGSSQSESDCCAAMAASSCGTAAKDDSVSGTASTVTLSSSFMEEIQGYDVE FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP DNFAKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHIL KECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP VPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDSVP PTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDK VAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSA QRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAAVRQNHEEIMDAKPELLAFQ RPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDS GI NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacactgtgaaaacagctgtggatccagccagtccgagagcgactgttgc gccgccatggctgccagctcctgtgggactgcagcaaaagacgacagtgtgagtgggacg gccagcacggtgactctctccagctctttcatggaggagatccaggggtacgacgtggaa tttgacccacccctggaaagcaaatatgagtgccccatttgcttgatggctttgcgggaa gcggtgcagacaccttgcggccacaggttctgcaaagcctgcatcatcaaatcaataagg gatgcaggtcacaaatgtccagttgacaatgaaatactgctggaaaaccaactatttcct gacaattttgcaaaacgagagattctttcgctgatggtgaaatgtccaaatgaaggttgc ttgcacaagatggaactgaggcatcttgaggagcatcaagcacactgtgagtttgctctt atgagttgtccgcaatgccagcgtcccttccagaaatgccatcttaatattcatattctc aaggagtgtccaaggagacaggttccttgtgaaaactgtgctgtatcaatggcatttgaa gataaagagattcatgagcagaactgtcctttggcaaatgtcatctgtgaatactgcaat accatgctcatcagagaacagatgcccaatcactatgatctagactgccctacagcccca gtcccatgcacgttcagtgcttttggttgccatgaaaagatgcagaggaatcacttggca cgccacctgcaagagaatacccagtcgcatatgagaatgatggcccaggctgttcagact ttaagcctcgcggtagctcctgtgcctcaatgtaccatgcctctgtatgactctgtgcct cccacccggccttcctctgggcgtcactcagaagtccacaatttccaagaaaccattcaa cagttagagggtcgccttgtaagacaagaccatcaaatccgggaactgactgcaaaaatg gaaacccagagcatgtatgtaaatgagctcaagcgaactattcgaacccttgaggacaaa gttgctgaaatagaagcacagcagtgcaatgggatttacatctggaagattggcaacttt gggatgcacttgaaatcgcaagaagaggagaagcctgttgtcattcacagccccgggttc tacacaggcaaacccggctacaaactgtgcatgcggctgcacctgcagctgccgagcgcg cagcgctgcgccaactacatatcgctctttgtccacacgatgcaaggggagtacgacagc cacctgccgtggcccttccaggggacaatacgccttaccatccttgaccagtctgaagca gctgtgaggcaaaaccacgaagaaataatggacgccaaaccagagctcctggcctttcag agacccaccatcccccggaaccccaagggttttggctacgtgacttttatgcatctggaa gccctcagacaaagaaccttcatcaaggatgacacgttattagtacgctgtgaggtctcc acccgcttcgacatgggcagtcttcggagggagggttttcagccacggagtactgactca gggatatag

DBGET integrated database retrieval system