Bos taurus (cow): 540141
Help
Entry
540141 CDS
T01008
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
bta
Bos taurus (cow)
Pathway
bta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
540141 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
540141 (KDM2A)
04121 Ubiquitin system [BR:
bta04121
]
540141 (KDM2A)
03036 Chromosome and associated proteins [BR:
bta03036
]
540141 (KDM2A)
Enzymes [BR:
bta01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
540141 (KDM2A)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
540141 (KDM2A)
Ubiquitin system [BR:
bta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
540141 (KDM2A)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
540141 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
540141 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
540141
NCBI-ProteinID:
XP_024843223
BGD-bta:
BT17706
Ensembl:
ENSBTAG00000044032
VGNC:
56269
LinkDB
All DBs
Position
29:45087271..45179860
Genome browser
AA seq
1185 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSQNGQVWDSQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKVLLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQCSSTPWGPWKRGATARLFEEGNEKRKMEESDEEAV
QAKVLRPLRSCDEPLTPPPHSPTSMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERF
KRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVP
KLQAITASSANLRHSPRVLVQHCPARTPQRGDEEGLGGEEEDEEEEEEEDDSAEEGGAAR
LNGRGSWAQDGDESWMQREVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSR
CKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALST
SSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLR
LIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRR
IANVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaaggaaaaagaacttttgacttg
gaagagaagctccacaccaacaaatataatgcaaattttgttacttttatggaaggaaaa
gattttaacgtagagtatatccagcggggtggcttaagagatcctctgattttcaagaat
tccgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgtatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaggagcgagaaaaactc
tataatgtcatcagcttagagtttagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtagacaatatgtggccaaggcatttgaaagaaagt
cagactgaatcaacaaatgccatcttggagatgcagtatcctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccatgtggacttcggtggtacctcggtt
tggtatcatatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtatcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacaccttggtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaagatatacaacattgaagatcgaacacgggtt
cctaataagttccgctatccattctactacgagatgtgctggtacgtgctggagcgctat
gtgtactgcataaccaaccgctctcacctaactaaggaatttcagaaagagtctcttagc
atggatttggagttaaatgggttggagtctggaaacggggacgaggaagcagtagaccga
gagccccggcgcttgagcagtagacgttctgtcctcaccagccctgtggccaatggggtc
aacctggattatgatggactgggcaaaacctgcagaagtcttccaagtctgaagaaaact
ttgtctggggactcatcctctgactctagccggggttcccagaatggccaagtgtgggat
tcccagtgtagcccccgaaaggaccgacaggtgcatctgacccattttgagcttgaaggc
cttcgttgccttgtagataaattggaatctctgccactgcacaagaaatgcgtccctaca
gggatagaagacgaagatgctctcattgctgatgtgaaggttttgctggaggaacttgcc
aacagtgatcccaagttagccctcactggagtccctatagtacagtggccgaaaagggat
aagcttaaattcccaacccggccaaaggtgcgggttcctactatccccatcacaaagcct
cacactatgaaaccagcgccgaggttaacacctgtgcgcccagccgctgcttctcccatc
gtgtctggagccagacggagacgagtgcgatgtcgaaaatgcaaagcctgcgtgcaggga
gagtgtggtgtttgtcactactgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgttctccggcagtgcttggcacccagactgcctcactctgtcacatgt
tccctctgtggagaggtggatcaaaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ttgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaagaggacagc
tcagaaaaagcccagtgttcttctacaccctggggcccttggaaaagaggagccacagcc
aggctgtttgaggagggaaatgagaagcggaaaatggaagagagtgacgaagaagccgtg
caagccaaagtcctccggcccctgcggagctgcgacgagcccctcacgcccccacctcac
tcgcccacctccatgctgcagctcatccacgacccggcctccccccggggcgtggtgact
cggtcatcccctggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttc
aaacggcggcagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggag
aacaatcccagcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcg
tacctcactgtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgccc
aagctgcaggccatcacggcctcctctgccaaccttcgccattccccccgtgtgctggtc
cagcactgcccagcccgaaccccccagcgcggggatgaggaggggctggggggagaggag
gaggacgaggaggaggaggaggaggaagatgacagtgcagaggaggggggtgcggccagg
ctgaatggccggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtc
tggatgtctgtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgc
aagacgtggtataaatggtgctgcgacaagagactttggacaaaaattgacttgagtagg
tgtaaggctattgtaccccaggctctcagtggcatcatcaagaggcagccagttagcctt
gacctcagttggaccaacatctccaaaaaacagctgacatggctcgtcaataggctgcca
ggactgaaagacctcctcctagcaggctgctcctggtctgcagtctctgccctcagcacc
tccagctgcccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccct
caaattcgggacttgctgactccaccggcggataaaccgggccaggacaatcgcagcaag
ctccggaacatgaccgacttccggctggcaggccttgacatcacagacgccacgcttcgt
ctcatcattcgccacatgcccctcctgtctcgactcgacctcagtcactgcagccacctg
acagaccagtcctccaatctgctcactgctgttgggtcttccactcgttactccctcaca
gagctcaacatggcaggttgcaataaactgacagaccagaccctgatctacctacggcgc
atcgccaacgtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgc
gagcacttcatctcagacttgtccatcaacagtctgtactgcctgtctgacgagaagctg
atacagaagatcagctaa
DBGET
integrated database retrieval system
