KEGG   Bos taurus (cow): 613811
Entry
613811            CDS       T01008                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 precursor
  KO
K10031  C-X-C motif chemokine 12
Organism
bta  Bos taurus (cow)
Pathway
bta04060  Cytokine-cytokine receptor interaction
bta04061  Viral protein interaction with cytokine and cytokine receptor
bta04062  Chemokine signaling pathway
bta04064  NF-kappa B signaling pathway
bta04360  Axon guidance
bta04670  Leukocyte transendothelial migration
bta04672  Intestinal immune network for IgA production
bta04810  Regulation of actin cytoskeleton
bta05163  Human cytomegalovirus infection
bta05200  Pathways in cancer
bta05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    613811 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    613811 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    613811 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    613811 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    613811 (CXCL12)
   04672 Intestinal immune network for IgA production
    613811 (CXCL12)
   04062 Chemokine signaling pathway
    613811 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    613811 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    613811 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    613811 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    613811 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:bta04052]
    613811 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:bta00536]
    613811 (CXCL12)
Cytokines and neuropeptides [BR:bta04052]
 Cytokines
  Chemokines
   613811 (CXCL12)
Glycosaminoglycan binding proteins [BR:bta00536]
 Heparan sulfate / Heparin
  Chemokines
   613811 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 613811
NCBI-ProteinID: NP_001106645
BGD-bta: BT10949
Ensembl: ENSBTAG00000005077
VGNC: 27848
UniProt: Q0P5I9
LinkDB
Position
28:45022421..45051626
AA seq 89 aa
MDAKVFVVLALVLTALCLSDAKPVSLSYRCPCRFFESHVAKANVKHLKILNTPNCSLQIV
ARLKNNNRQVCIDPKLKWIQEYLDKALNK
NT seq 270 nt   +upstreamnt  +downstreamnt
atggatgccaaggtcttcgtcgtgctggccctcgtgctgactgcgctgtgcctcagcgac
gcgaaaccggtcagcctgagctacagatgcccttgccgattctttgagagccatgtcgcc
aaagccaacgtcaagcacctcaaaatcctcaacactccaaactgctcccttcagatcgtg
gcaaggctgaagaacaacaataggcaagtgtgcattgacccgaaattgaagtggattcag
gaatacctggacaaagctttaaacaagtaa

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