KEGG   Bos taurus (cow): 782032
Entry
782032            CDS       T01008                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 6-like
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
bta  Bos taurus (cow)
Pathway
bta04010  MAPK signaling pathway
bta04064  NF-kappa B signaling pathway
bta04120  Ubiquitin mediated proteolysis
bta04140  Autophagy - animal
bta04144  Endocytosis
bta04380  Osteoclast differentiation
bta04620  Toll-like receptor signaling pathway
bta04621  NOD-like receptor signaling pathway
bta04622  RIG-I-like receptor signaling pathway
bta04657  IL-17 signaling pathway
bta04722  Neurotrophin signaling pathway
bta04936  Alcoholic liver disease
bta05132  Salmonella infection
bta05133  Pertussis
bta05135  Yersinia infection
bta05140  Leishmaniasis
bta05142  Chagas disease
bta05145  Toxoplasmosis
bta05152  Tuberculosis
bta05160  Hepatitis C
bta05161  Hepatitis B
bta05162  Measles
bta05168  Herpes simplex virus 1 infection
bta05169  Epstein-Barr virus infection
bta05170  Human immunodeficiency virus 1 infection
bta05171  Coronavirus disease - COVID-19
bta05200  Pathways in cancer
bta05222  Small cell lung cancer
bta05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
bta05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    782032
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    782032
   04064 NF-kappa B signaling pathway
    782032
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    782032
   04140 Autophagy - animal
    782032
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    782032
   04621 NOD-like receptor signaling pathway
    782032
   04622 RIG-I-like receptor signaling pathway
    782032
   04657 IL-17 signaling pathway
    782032
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    782032
  09158 Development and regeneration
   04380 Osteoclast differentiation
    782032
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    782032
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    782032
  09162 Cancer: specific types
   05222 Small cell lung cancer
    782032
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    782032
   05161 Hepatitis B
    782032
   05160 Hepatitis C
    782032
   05171 Coronavirus disease - COVID-19
    782032
   05162 Measles
    782032
   05168 Herpes simplex virus 1 infection
    782032
   05169 Epstein-Barr virus infection
    782032
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    782032
   05135 Yersinia infection
    782032
   05133 Pertussis
    782032
   05152 Tuberculosis
    782032
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    782032
   05140 Leishmaniasis
    782032
   05142 Chagas disease
    782032
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    782032
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    782032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    782032
   04121 Ubiquitin system [BR:bta04121]
    782032
Enzymes [BR:bta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     782032
Membrane trafficking [BR:bta04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    782032
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    782032
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 SlyX U-box Med21 PspA_IM30 Spc29 DUF4455 DUF16 Rhabdo_ncap_2 DUF3450 DUF7310 DUF7607
Other DBs
NCBI-GeneID: 782032
NCBI-ProteinID: XP_059747702
Ensembl: ENSBTAG00000053165
LinkDB
Position
11:17275559..17277621
AA seq 542 aa
MSLLHCENSCASSQSESDCCAPMAASSCGTAAKDDSVSGTASTVTLSSSFMEEIQGYDVE
FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP
DNFAKXEILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHIL
KECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP
VPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMKAQAVQTLSLAVAPAPQCTMPLYDSVP
PTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDK
VAETEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSV
QRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEATVRQNHEEIMDAKPELLAFQ
RPTIPRNPKGFGYVTLMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDS
GI
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgagtctgctacactgtgaaaacagctgtgcatccagccagtccgagagcgactgttgc
gcccccatggctgccagctcctgtgggactgcagcaaaagacgacagtgtgagtgggacg
gccagcacggtgactctctccagctctttcatggaggagatccaggggtacgacgtggaa
tttgacccacccctggaaagcaaatacgagtgccccatttgcttgatggctttgcgggaa
gcggtgcagacaccttgcggccacaggttctgcaaagcctgcatcatcaaatcaataagg
gatgcaggtcacaaatgtccagttgacaatgaaatactgctggaaaaccaactatttcct
gacaattttgcaaaatgagagattctttcgctgatggtgaaatgtccaaatgaaggttgt
ttgcacaagatggaactgaggcatcttgaggagcatcaagcacactgtgagtttgctctt
atgagttgtccgcaatgccagcgtcccttccagaaatgccatcttaatattcatattctc
aaggagtgtccaaggagacaggttccttgtgaaaactgtgctgtatcaatggcatttgaa
gataaagagattcatgagcagaactgtcctttggcaaatgtcatctgtgaatactgcaat
accatgctcatcagagaacagatgcccaatcactatgatctagactgccctacagcccca
gtcccatgcacgttcagtgcttttggttgccatgaaaagatgcagaggaatcacttggca
cgccacctgcaagagaatacccagtcgcatatgagaatgaaggcccaggctgttcagact
ttaagcctcgcggtagctcctgcgcctcagtgtaccatgcctctgtatgactctgtgcct
cccacccggccttcctctgggcgtcactcagaagtccacaatttccaagaaaccattcaa
cagttagagggtcgccttgtaagacaagaccatcaaatccgggaactgactgcaaaaatg
gaaacccagagcatgtatgtaaatgagctcaagcgaactattcgaacccttgaggacaaa
gttgctgaaacagaagcacagcagtgcaatgggatttacatctggaagattggcaacttt
gggatgcacttgaaatcgcaagaagaggagaagcctgttgtcattcacagccccgggttc
tacacaggcaaacccggctacaaactgtgcatgcggctgcacctgcagctgccgagcgtg
cagcgctgcgccaactacatatcgctctttgtccacacgatgcaaggggagtacgacagc
cacctgccgtggcccttccaggggacaatacgccttaccatccttgaccagtctgaagca
actgtgaggcaaaaccacgaagaaataatggacgccaaaccagagctcctggcctttcag
agacccaccatcccccggaaccccaagggttttggctacgtgactttaatgcatctggaa
gccctcagacaaagaaccttcatcaaggatgacacgttattagtacgctgtgaggtctcc
acccgcttcgacatgggcagtcttcggagggagggttttcagccacggagtactgactca
gggatatag

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