Bemisia tabaci (sweet potato whitefly): 109042909
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Entry
109042909 CDS
T06019
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
btab04131
]
109042909
Membrane trafficking [BR:
btab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109042909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
109042909
NCBI-ProteinID:
XP_018915432
LinkDB
All DBs
Position
Unknown
AA seq
2022 aa
AA seq
DB search
MSLSLRLRQFHIPKCKGDKVAKVEFRGVLYVSRLLEDKGEWIIVDQRFVWPTARGVEGHE
EINIQVFCTSRYLSDKLVGSYKLTLQRLIIDGKLNVSDSLLGPNNKPLPASVEFEVCYTP
PVDTPSTTYSSWVGSQTLDTDQEMLMRVEENIAHLERNFLDRRNSVGSQMGSLDQPDLVL
HPQSSPYNSGSEKSPEKKRLTLKNSVKSLMKLGKQRPSKDKEKLIRDDSHGQRDIQMGQS
EPVIRRTTSVTSISSDNESVCSNPEFPSRIQSKLKKLPDECQSLLKAQDFQICITIIEAR
QLAGLNMDPVVCVQVGDVKKYTSVKESTNCPYYNEYFVFDFHMPAIMLFDKIISLSVLQS
RKILRSDKMLGSFKLDVATVWAQTDHQFYHRWALLTDPEDIAGGPKGYLKCDISVVGKGD
SVKVPPKSEKDEDDIEANLLLPDGVPMERQRAKFIVKIYRADGLPKMNSSIVANVKKAFT
REVRDLVDPYVQVSFAGLTGKTSIKKNSYAPVWNEEIIFSEMFPPLCQRIKIQLRDDSVK
RAVIGTHFVDLKTISNDGDKGFLPTFGPNFIHLYGSTRDYNILDEHASLNLGLGEGVSYR
GRLLVAIRTEITDNVDVAPAEVEVEPTYPITEASYSKNEEFFLFTTVLEATMIDKKLSDK
PMFFELSVGNAGNMLDGYNESSHNNVECEGDEQLEHVTSESWQSSTSASKPMTHDRIYYY
LPYWEDKPCLHVRSVWPDHRRRMYNSNLIAQIIEKLEEGLSEVQSSILVEDSDAEKKLKV
VLEELSMTCARYTTISKSSSSGSGTGKTKLDKERTKMCLREIDLIGGQARTLKALVTKNS
LKERFKTAHSYLTKLKSIMEDPQHSLPDVFIWLISNGKRTAYQRIPARDLIFSVVNEESG
RWCSKVRSLFLKLPGKKGIGPSGWTIQAKLQIYMWMGLLKHKMYFVNGLPKGYEVSHEIS
NAERPRALPPSVIHYTMKYSFQMRAYIYQARSLIGSDASGLSDPFARVIISEYCRTTQVI
DETLSPTWDELLVFDEILIYGVREEIKNDPPIVIIEIFDQDKVGKSEFIGRAIAKPHVKL
LEEPYSKPNFPPSLEWYEIHRGLEQAGELLATFELLELPNRTATANLPELPEPKITSVIP
IQSPTEAHHGPVLPVPKGIRPTLAKYRIEALFWGLRDLKRIHLMSVDRPRVDIECAGHIL
NSSVIQNAKKNPNFSNPVKFLDLELPEQELYRPPLTIRAIDCRSFGRFTLVGTHMINSIH
KYMYQPVTRKERELEERKRSTVLAQNGDVNNVNTFVTSNNEYTNYNRSIFSNDRIIYFDM
DLPYFSKKAMKTEFNRKRKASMVEDYVDDDDESRDWWTKYFASVEATIEEGKEARKENVL
QTNGGLYADHPDTAQPKNAKHNKLGPSTAAKLVAKLSPKTIQRKQAKKIAKIKIYSNELE
AQSEFNGFREWLLPFDLYRGKKTGDDSEDENRIVGTFKGSIKVYKWPLPKDIEDHTIMGF
DPQYGFFQGLPSNDPIHVLVRVYIIKANDLHPMDLNGKADPYIVLQLGSKKINDKDNYIS
KQLNPVFGKCFEIEATFPQDSMLTIQVLDWDLVGSDDLIGETRIDLENRFYSRHRATCGL
SRKYEDFGYNQWRDPMKPTQILGKLCKDAKMEVPIYSNGKVKVGKHTFCLQPSSETSSDW
FFVKGIEEHMALAVLHNWHDFPRIGCELVPEHIETRPLYNPEKLGIEQGKLEMWVDLFPM
DMPLPGPPIDISPRKPKSYELRVIIWNTDEVVLEDDAFFTGEKMSDIYVKGWLKGPEDCQ
STDIHYRSLTGEGNFNWRFIFPFDYLVAEEKIVISKKESLFSWDESESKIPVRLELQVWD
ADHFSADDFLGAITLDLNRFPRGAKSSKLCTLSMLQDSSVPMINIFKQKRVKGWWPFYVK
KENEEMELTGKVEAELHLLTQEEAEKNPAGQGRSEPDPLDKPNRPDASFMWLLNPLKSIR
YIVWHNYKWKILKALIFLALFFMIFLFIYAVPGYSVKLLLGA
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttccctccgcctacggcagttccacatccccaaatgcaaaggagacaaagtt
gcaaaagttgaatttcgaggtgttctgtacgtgtctcgacttctcgaggataaaggcgag
tggattatcgtcgatcagcgatttgtctggccgactgcaagaggcgttgagggtcatgag
gagataaacatccaagtgttttgcacgagtagatacctgagcgacaaattggtcgggtct
tacaaactcacgcttcaacgactaatcatcgatggaaaactcaatgtttccgactcactc
ctcggtcccaacaacaaaccactcccggctagcgttgaatttgaagtttgctacacacca
ccggtggacacgccgtcaacgacctacagctcttgggtgggctcgcaaaccctggacacc
gatcaggaaatgctcatgagagtcgaggagaacatcgcgcacttggagcggaacttcctg
gacaggaggaacagcgtcggatcgcaaatgggttctctggatcagcctgacctcgtcctc
caccctcaaagctcaccctacaattccggatccgaaaagtcgccggagaaaaaaaggcta
accctgaaaaacagtgttaaaagtctgatgaaattaggaaaacaaaggccctctaaggac
aaggaaaaactcataagagacgacagtcatggtcaacgggatattcagatgggccaatcg
gaacctgtcattagacgcacaacaagcgtcacatctatatcatcagataacgaatcagtt
tgttccaacccggagttcccatcgagaattcaaagtaagttgaaaaaactgccggacgaa
tgtcaaagtctgctgaaagctcaggatttccagatctgcatcactataatcgaagcgcgt
cagctggcagggctcaacatggacccggtcgtctgcgtccaagtcggggatgtcaagaaa
tacacgagtgtcaaagaaagcaccaactgcccttattacaacgagtacttcgtatttgat
tttcatatgccagcaataatgctctttgataaaatcatctcactatcggtcctccagtca
aggaaaatccttcgaagtgacaaaatgttaggcagctttaagctagatgtggcgactgtc
tgggctcagacagatcaccagttttaccatcgatgggctttgctcaccgacccagaggac
atagccggaggaccgaagggatatttaaagtgtgacatatctgtggttggtaaaggtgat
tctgttaaagttccaccgaaaagtgaaaaagatgaggatgacatcgaagcgaacttgctg
ttgccggatggagttccgatggaaagacagagagcgaagttcatcgttaaaatctatagg
gcggacggactaccaaaaatgaattcttccattgttgccaatgttaaaaaagcttttaca
agagaggtgcgagacctcgttgatccatatgtacaagtatcctttgctggactcactggt
aaaacaagcattaagaaaaatagttatgctccagtttggaatgaagaaatcattttttca
gagatgttccctcctctgtgtcaacggataaaaattcaactcagggatgattctgtaaag
agggccgtaatagggactcatttcgtggatttgaaaaccatctccaatgatggcgataaa
ggtttcctaccgacgttcggcccgaacttcatccacctgtacggctcgacgcgggactac
aacatcctggacgagcacgcgagcctgaacctgggcctgggcgagggcgtctcgtaccgc
gggcgcctcctcgtggccatccgcacggagatcacggacaacgtggacgtggcgccggcc
gaggtcgaggtggagcccacctaccccatcaccgaggcctcctactccaagaacgaggag
ttcttcctcttcaccaccgtcctcgaggccaccatgatcgacaagaagctcagcgacaag
cccatgttcttcgagctcagcgtcggcaacgccggcaacatgctcgacggctacaacgag
tccagtcataataacgtggagtgcgagggtgacgagcagttggagcacgtgacgtcagag
tcgtggcagagctccacgtcggcctccaagccgatgacccacgataggatatactattac
ctcccgtattgggaggataagccgtgcctccatgtgaggtccgtgtggccggatcaccgc
aggaggatgtacaactctaacctcatagctcaaatcatagagaaattagaagaagggctg
agcgaggtgcagtcgtcaattctcgtcgaagactcagacgccgagaaaaaactgaaagtt
gtgttggaagaattgagtatgacgtgcgcccggtacacaacgatatcgaaaagctccagc
tccggctcgggaaccggcaaaacgaaactggataaagagagaacgaaaatgtgtctccga
gagatagatcttatcggtggccaagccaggactttaaaagctctggtaacaaaaaattct
ctgaaggaaaggttcaagactgctcatagttacctgacaaaattgaaaagtatcatggag
gatccccaacactcattacccgatgtatttatctggttgataagcaacggtaaaagaaca
gcatatcagcgaattccagccagggatcttattttctccgtagtgaatgaggagagcggc
aggtggtgctcaaaagttcgatctctatttttgaagctgcctggtaaaaaaggcataggt
ccgagtggatggacaatccaagcaaaactgcagatttacatgtggatgggtctgttaaag
cacaaaatgtactttgtaaacggcctgccgaaaggttacgaagtttctcatgagataagc
aatgctgaaagaccgcgtgctttacctccctctgtcattcattacaccatgaagtattca
tttcagatgcgagcttatatttatcaagcaagatctttgattgggtctgatgcctctgga
ctatccgatcccttcgctagagttatcatatcagagtactgtagaactactcaggtaatt
gatgagactttgagcccaacttgggatgaattgcttgtgttcgacgagatactgatttac
ggtgtcagggaggaaattaaaaatgatccaccaatcgtcattatcgaaatctttgatcaa
gacaaagtgggcaaatcagaatttattggaagagcaatcgcaaaaccgcacgtgaaactg
ttggaagagccgtattccaagcctaactttcctccatcattagagtggtacgaaattcac
cgaggccttgaacaagcgggagagctccttgcaacttttgaactcctggagcttcctaac
cgaactgccaccgcaaatctacccgagttacctgagcctaaaatcacgagtgtcatccca
attcagagcccaacagaggctcatcacgggcctgtcctgcctgttccaaaaggcataaga
cctaccttagcaaagtacaggatcgaagccttattttggggcttacgggatctaaagaga
attcatttgatgagtgtggatcgaccaagggttgacatcgagtgtgctggacatattctc
aactcctcggtcattcaaaacgctaagaagaacccaaactttagcaatcctgtcaaattt
ttagatctagagcttccagagcaagaattgtacagacctccactgacaataagagcgata
gattgccgtagcttcggtcgttttacactggttggaacgcatatgatcaactcaattcac
aagtatatgtatcagccagtgacaaggaaagaaagggaactagaggaaagaaagcgctca
accgtgctagcccaaaatggcgatgtcaataatgtaaatacttttgtaactagcaataat
gaatacaccaattataatagaagtattttctctaatgatcgaattatttattttgatatg
gatttaccttatttttctaaaaaagcaatgaaaactgagtttaatcgaaagcggaaagca
agcatggttgaagattatgtagatgacgatgatgagagcagagactggtggactaaatat
ttcgcatctgtagaagctacgatcgaggaaggtaaagaggcaagaaaagaaaatgtattg
cagaccaatggtggactttacgctgatcaccccgatactgctcagccaaaaaatgcaaag
cataataaattaggccccagcacagctgccaaattagtcgctaaattgagcccgaaaaca
atccaacggaagcaagcgaaaaaaattgcaaaaataaagatctactccaatgagttagaa
gctcaaagtgagttcaatggattcagagaatggctgctgccattcgacttatatcgaggg
aagaaaactggagatgactcggaagacgaaaatcggattgttggaactttcaagggttcc
atcaaagtctacaagtggccactaccgaaagacatcgaggatcacacgattatgggattc
gatcctcagtacgggtttttccaagggttgccatccaacgacccgattcacgttctggtc
cgcgtctacatcatcaaagccaacgatctccatccgatggatttgaacgggaaagcggac
ccttacatagtcttgcaattgggatccaaaaagatcaacgataaagacaattacatatca
aagcagctcaatcctgtcttcggaaagtgtttcgaaattgaagcaactttccctcaagac
tcaatgctgacaattcaagttttggactgggatctggttggttcggatgatctgatcggc
gaaacacgaattgatttggagaatcgattttacagtcgtcatagagccacgtgtggtctt
tcaaggaagtatgaagactttggctacaatcagtggagggatccgatgaaaccgactcag
atccttggaaagttgtgcaaagatgcgaaaatggaggtgccaatatacagcaatggaaaa
gtcaaagttggaaagcacacgttttgcttgcagccaagcagcgaaacttcatcagattgg
ttctttgtcaaaggcattgaagaacacatggctttggctgttttgcacaattggcacgat
tttcctagaattggctgtgaattagtacctgaacacatagaaacgcgtccactatacaat
ccagaaaaacttggtatagaacagggaaagctggagatgtgggtagatttgtttccgatg
gacatgcctctgcctggaccgcccatagacatatcaccaaggaaaccaaaatcctacgag
ctgcgggttatcatttggaacaccgatgaggttgtcctcgaggatgatgccttttttacc
ggtgaaaaaatgtctgacatttacgttaaagggtggctaaaaggaccagaggactgccaa
tcgacggacattcactatcgctccctgactggagaggggaattttaactggagattcatc
ttcccatttgattaccttgtagcggaggaaaaaattgtgatatcgaagaaagagtccctt
ttctcctgggacgagagtgaaagtaaaatccccgtcaggttggagctacaagtttgggat
gctgatcatttctcggcagatgatttcttaggtgccattacactggatttgaaccgcttc
ccacgtggtgcaaaatcgagcaaactatgcactctttccatgttgcaagacagttctgtg
ccgatgataaatatttttaagcagaaaagagtgaaaggatggtggcctttttatgtaaaa
aaggagaatgaggagatggaattgacgggtaaagtggaggcagagctacacctcctaaca
caagaagaggccgagaagaaccctgctggtcagggtagaagtgaaccagacccgctggat
aaaccaaatcgaccagatgcgtcgttcatgtggctcctgaacccattaaagtccatccgc
tacattgtgtggcacaactacaaatggaaaattttgaaagctttaatttttctcgcctta
ttttttatgattttcctctttatttatgccgtgcctggttattctgtaaaattgttatta
ggagcctga
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