Budorcas taxicolor (takin): 128052481
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Entry
128052481 CDS
T08909
Symbol
RIGI
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04064
NF-kappa B signaling pathway
btax04622
RIG-I-like receptor signaling pathway
btax04623
Cytosolic DNA-sensing pathway
btax05160
Hepatitis C
btax05161
Hepatitis B
btax05162
Measles
btax05164
Influenza A
btax05168
Herpes simplex virus 1 infection
btax05169
Epstein-Barr virus infection
btax05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
128052481 (RIGI)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128052481 (RIGI)
04623 Cytosolic DNA-sensing pathway
128052481 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
128052481 (RIGI)
05160 Hepatitis C
128052481 (RIGI)
05171 Coronavirus disease - COVID-19
128052481 (RIGI)
05164 Influenza A
128052481 (RIGI)
05162 Measles
128052481 (RIGI)
05168 Herpes simplex virus 1 infection
128052481 (RIGI)
05169 Epstein-Barr virus infection
128052481 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
btax04054
]
128052481 (RIGI)
Enzymes [BR:
btax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128052481 (RIGI)
Pattern recognition receptors [BR:
btax04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
128052481 (RIGI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
128052481
NCBI-ProteinID:
XP_052501016
LinkDB
All DBs
Position
8:14558563..14604819
Genome browser
AA seq
943 aa
AA seq
DB search
MTAEQRRNLHAFRGYVSKILDPTYILSYMTPWFRDDVVQHIQAERNNKGPMEAASLFLQV
LLELQEEGWFRGFLDALHQAGYSGLYEAIESWDFQKIEKLEEYRLLLKRLQPEFKTTINP
KDILPEISGCLISQECEEIIQISSNKGLMAGAEKMIECLLRSDKENWPKTLKLALEKEES
KFSELWMVEKGAENVQMKDLEDDEMKTLDIQIVYKEEPENQNLSQNSCPSSEVRPTYSPL
KPRNFQLELALPAQKGKNTIICAPTGCGKTFVALLICEHHLKKFPQGRKGKVVFFAVQLP
LYEQQKSAFSEYFERLGYKVSGISGEIADSVSVEQIVENNDIIILTPQILVNSLKDGTIP
SLSIFTLMIFDECHNTNKNHPYNMIMFNYLDQKLGGSSDSLPQVVGLTASVGVGDAKNAA
EATEYICRLCASLDTSVLTTVRDNLEELEEVFYKPQKLFRKVESRNTDKFKCIISQLMAE
TEALAKSIFEELGTVTLENLSRIQNRNFGTQKYEQWIIAVQKACMVFQMPDKDEESRICK
ALFLYTSHLRKYNDALIISEDARMKDALNYLKNFFSNVRAAGFDAIEQDLTQRFEEKLVK
LEDISMDPSNENPKLKDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIEENPELSFL
KPCILTGRGRTNQTMGMTLPAQKCALDAFRTNRDSKILIATSVADEGIDIAQCNLVILYE
YVGNVIKMIQTRGRGRARGSKCFLLTSNADVIEKEELNICKEKMMNDSISSLQRWNEAVF
REKIHQIQVQEKLIRDNQGKVKPVVDKKNKKLLCGKCKTFACYTADIRVVEECHFTVVRD
AFRECFVTKLHPRPKKFGNFEKKSKIFCARKDCLHDWGIHMTYKTFEIPVIKIESFVVED
VATGAQTLYAKWKDFNFEKIPFDAAEMSAGAQDLNLQGMNGLE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgagcagcggcggaatttgcacgccttccgcggctatgtcagcaagatcctg
gaccctacctacatcctgagctacatgaccccctggtttagggacgatgtggtgcagcat
attcaggccgagagaaacaacaaggggcccatggaggctgcctcacttttcctccaggtc
ctattggagctccaggaggaaggctggttccgtggctttttggatgcccttcaccaagca
ggttattctggactttatgaagccattgaaagttgggatttccaaaaaattgaaaaattg
gaggagtatagattacttttaaagcgtttacaaccagaatttaaaaccacaatcaatcca
aaagatatccttcctgaaatatctggatgtttaattagtcaggaatgtgaagaaattatt
cagataagttccaacaaggggctgatggcaggtgcagagaaaatgattgaatgccttctc
agatcagacaaggagaactggcccaaaactttgaaacttgcactggagaaagaagagagc
aagttcagcgaactgtggatggtagagaaaggtgcagaaaatgttcaaatgaaagatctt
gaggatgatgaaatgaaaactttggacatacagattgtctacaaggaagaaccagaaaac
cagaatcttagccagaattcctgtccttcttcagaagtgcgtcctacttacagcccattg
aaaccaagaaatttccaactagagctcgctttacctgctcagaagggaaagaatacaata
atatgtgctcctactggttgtggaaaaacctttgttgcccttcttatatgtgaacatcat
cttaagaaatttccgcaaggacgcaaggggaaagttgtcttttttgctgttcaactcccg
ctgtatgaacagcagaaatctgcgttctcagaatattttgaaagacttgggtacaaagtt
tcaggcatttctggagagatagctgacagtgtctctgtggaacagattgttgagaacaat
gacatcatcattttaacaccacagattcttgtgaacagccttaaagatgggactatccca
tcactctccatctttactttgatgatatttgatgaatgtcacaacaccaataaaaaccat
ccatataatatgatcatgtttaattatctagatcagaaactgggaggatcttcagactca
ctgccccaggtcgttgggctgactgcctcagttggtgttggagatgccaaaaatgcagct
gaagccacagaatatatctgcagactgtgtgcttctctcgacacgtcagtgttaacaaca
gtcagagacaacttggaggaactggaggaggttttttataagccccagaagcttttcagg
aaagtggaatcacggaatacagacaaatttaaatgcatcatatctcagctgatggcagag
acagaggctctagcaaagagtatctttgaagaacttgggaccgtaactcttgaaaactta
tctcgcattcaaaataggaattttgggacacagaaatatgaacagtggattatcgcagtt
cagaaagcgtgcatggtgtttcagatgccagacaaagatgaagaaagcagaatttgtaaa
gccctgtttttgtacacgtcacatttgcggaaatacaatgatgccctcattatcagtgag
gatgcacggatgaaagatgctctgaattacttgaaaaacttcttcagcaatgtccgggca
gcaggatttgatgcaattgagcaagatctcactcagagatttgaagaaaagctggtgaaa
ctagaagatatttccatggatcccagcaatgagaaccctaaactcaaagatctctgcttc
atcttgcaagaggaataccacttaaacccagagaccagaaccatcctctttgtgaaaacc
cgagcacttgtggatgccttaaagaagtggattgaagaaaatcctgaactcagctttcta
aaaccttgcatattgactggacgtggcagaacaaatcagacaatgggaatgaccctccca
gcacagaagtgtgcattggacgcgttcagaaccaacagagacagcaagattctaattgct
acctcggttgctgatgaaggcattgacattgctcagtgcaatctggtcatcctctacgag
tatgtgggcaatgtcatcaaaatgatccaaaccagaggtagaggaagagcaagagggagc
aagtgcttccttctgactagtaatgctgatgtaatcgaaaaagaagaactgaacatctgc
aaagaaaaaatgatgaatgactccatttcaagcctgcagagatggaatgaagcagtattt
agggaaaagattcaccagatacaggttcaagaaaaattaatcagggataatcaaggaaaa
gtaaaacctgttgttgataagaaaaataaaaaactgctctgcggaaagtgcaaaaccttt
gcgtgttacacagctgatataagagtggtggaggaatgccatttcactgtggttagagat
gctttcagggagtgcttcgtgactaagttacatcccagaccgaagaaatttgggaatttt
gagaagaaatctaagatcttctgtgccaggaaggactgcctccatgactggggaattcac
atgacgtacaagacatttgagattccagttataaagatcgaaagttttgtggtggaagat
gttgcgactggagctcagacactgtatgcaaagtggaaggactttaattttgagaagatc
ccatttgatgctgcagaaatgtccgctggcgctcaggacctcaatctgcagggaatgaat
ggccttgaatga
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