Budorcas taxicolor (takin): 128057789
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Entry
128057789 CDS
T08909
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128057789 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btax03400
]
128057789 (LIG4)
Enzymes [BR:
btax01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
128057789 (LIG4)
DNA repair and recombination proteins [BR:
btax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128057789 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
128057789
NCBI-ProteinID:
XP_052506249
LinkDB
All DBs
Position
12:complement(83803671..83806241)
Genome browser
AA seq
844 aa
AA seq
DB search
MRLILPHLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAM
IAYFVLKPRCLQKGSLSIQQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSALEQKWLI
RMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFK
PMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYEDQFGASPQ
EGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSELQTCYCVF
DVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNEAIDKREE
GIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMMSHFLCAV
AEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILCGTEKPEV
YIKPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKAC
GKLASKHLYVSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFEDVEFCVM
SGTGNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDVVKPEWLL
ECFRTRSCVPWQPRFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSGIKNAGEQ
TPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAITALELRF
HGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDKCELQEEN
QYLV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttattcttcctcatctggaaagggagagaatggcctatggaatcaaagaaatt
atgctggctaagctttatgttgaattgcttaacttgcctcgagatggaaaagatgccctt
aagcttttgaactacagaacaccgaccggaacccgtggagatgctggagactttgcaatg
attgcgtactttgtattgaaacccagatgtctacagaaaggaagcctaagcattcagcaa
gtaaatgacattttagactccattgccagcaataattctgccaaaaggaaagacctaatg
aagaaaagtgttcttcagcttataactcagagttcagcacttgaacaaaaatggctgata
cggatgattgttaaggacctaaagcttggttttagtcagcacactatattttctgttttt
caccgtgatgctgctgagttgcataatgtcaccacagatctggagaaggtctgtaggcaa
ctgcacgatccttcagtgggactcagtgacatttccatcaccctattctccgcctttaaa
cccatgctagccgctatagcagatattgagcgaattgagaaggacatgaaacaccagagt
ttctacatcgaaaccaagctcgacggcgagcggatgcagatgcacaaggatggggatgtg
taccggtacttctctcgcaatgggtataactatgaggaccagtttggtgcttccccacag
gaagggtctctcacaccattcattcataatgcattcagaacagatgtgctgaactgtatt
ctcgacggtgagatgatggcctacaaccctaacacacagacttttatgcaaaaggggaat
aagtttgatattaaaagaatggtggaagattctgagctgcagacttgttactgtgttttt
gatgtattgatggttaatgataaaaagctaggacatgagaccctgagaaagaggtttgaa
attcttaatagtgttttcacacctgtaccaggtagaatagaaatagtgcagaaaacacaa
gctcatactaagaaagaagtaattgatgctttgaatgaagcgatagataaaagagaagag
gggatcatggtaaaacacccgctgtccatttacaagccagataaaagaggtgaaggatgg
ttaaaaattaaaccagagtatgtcagtggactgatggatgagctggacatcttaatcgtc
gggggctactgggggaagggtgcccggggtgggatgatgtctcattttttgtgtgctgtg
gcagagaagcccgcttctggtgaaaaaccctcagtgtttcacactctctgtcgcgttggc
tcgggttacactatgaaagaactgtatgacctcggtttgaagttggcgaaacactggaag
ccttttcataggaaagccccaccaagcaacattctgtgtggaacagagaagccagaggtc
tacatcaagccttgcaattcagtcattgttcaggttaaggccacagagatcgtccccagt
gacatgtataaaaccggctgcacgttgcgttttccacggattgagaaaataagagaagac
aaagaatggtacgaatgtacatccctggaggacttagagcaacttcgagggaaggcctgt
ggaaagctcgcgtccaaacacctttacgtgagtggcgatgatgaaccacaagagaaaaag
cggaaagctgccccaaagatgaagaaagtcattggaattattgagcacctaaaagctccc
aacctttctaacgtaaacagggtttctactgtctttgaagacgtggagttttgtgtcatg
agtggaaccggcaaccatcccaagcctgacctggaaaacagaatcgccgagttgggtggt
tacatagtacagaacccaggcccagacacgtactgtgtgatcgcagggtctgacaacatt
cgagtgaaaaatatcatctcttcagataaacatgatgtcgtcaagccagagtggctgcta
gagtgttttaggaccagaagctgtgtgccctggcaaccccgcttcatgatccacatgtgc
ccgtcgacaaagcaacactttgcccaggaatacgaccaatacggggatagttactttgtc
gacacagatttgcaccaactgaaggaagtgttttcgggaattaaaaacgctggtgagcag
actcctggggagatgagtcctgtgattgctgatttggaacacaggtattcctgggccagc
atgcctcttagcatgtttagacaccacaccgtttatttggacttgtacgctgtcatcaat
gacttaagtaccagaatcaagggagctaggttagccatcacagccttggagcttcgattt
catggagcacaagtagtttcctatttagctgagggagtgtctcacgtcattgttggggaa
gatcagagtcgggttgcagacttgaaagctattcgaaggactcttaagaggaaatttaaa
atcttacaagaacgttgggtcactgtttcaatagacaagtgtgaattacaggaggaaaat
cagtatttggtttga
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