Budorcas taxicolor (takin): 128060227 Help Entry 128060227         CDS       T08909                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism btax  Budorcas taxicolor (takin) Pathway btax04010   MAPK signaling pathway btax04064   NF-kappa B signaling pathway btax04120   Ubiquitin mediated proteolysis btax04140   Autophagy - animal btax04144   Endocytosis btax04380   Osteoclast differentiation btax04620   Toll-like receptor signaling pathway btax04621   NOD-like receptor signaling pathway btax04622   RIG-I-like receptor signaling pathway btax04657   IL-17 signaling pathway btax04722   Neurotrophin signaling pathway btax04936   Alcoholic liver disease btax05132   Salmonella infection btax05133   Pertussis btax05135   Yersinia infection btax05140   Leishmaniasis btax05142   Chagas disease btax05145   Toxoplasmosis btax05152   Tuberculosis btax05160   Hepatitis C btax05161   Hepatitis B btax05162   Measles btax05168   Herpes simplex virus 1 infection btax05169   Epstein-Barr virus infection btax05170   Human immunodeficiency virus 1 infection btax05171   Coronavirus disease - COVID-19 btax05200   Pathways in cancer btax05222   Small cell lung cancer btax05235   PD-L1 expression and PD-1 checkpoint pathway in cancer btax05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:btax00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     128060227 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     128060227 (TRAF6)    04064 NF-kappa B signaling pathway     128060227 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     128060227 (TRAF6)    04140 Autophagy - animal     128060227 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     128060227 (TRAF6)    04621 NOD-like receptor signaling pathway     128060227 (TRAF6)    04622 RIG-I-like receptor signaling pathway     128060227 (TRAF6)    04657 IL-17 signaling pathway     128060227 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     128060227 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     128060227 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     128060227 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     128060227 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     128060227 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     128060227 (TRAF6)    05161 Hepatitis B     128060227 (TRAF6)    05160 Hepatitis C     128060227 (TRAF6)    05171 Coronavirus disease - COVID-19     128060227 (TRAF6)    05162 Measles     128060227 (TRAF6)    05168 Herpes simplex virus 1 infection     128060227 (TRAF6)    05169 Epstein-Barr virus infection     128060227 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     128060227 (TRAF6)    05135 Yersinia infection     128060227 (TRAF6)    05133 Pertussis     128060227 (TRAF6)    05152 Tuberculosis     128060227 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     128060227 (TRAF6)    05140 Leishmaniasis     128060227 (TRAF6)    05142 Chagas disease     128060227 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     128060227 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     128060227 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:btax04131]     128060227 (TRAF6)    04121 Ubiquitin system [BR:btax04121]     128060227 (TRAF6) Enzymes [BR:btax01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      128060227 (TRAF6) Membrane trafficking [BR:btax04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     128060227 (TRAF6) Ubiquitin system [BR:btax04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     128060227 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Spc29 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 U-box Med21 PspA_IM30 DUF3450 DUF7607 DUF4455 DUF7310 Myosin_tail_1 EzrA DUF16 ATG16 TMF_DNA_bd Motif Other DBs NCBI-GeneID:  128060227 NCBI-ProteinID:  XP_052508533 LinkDB All DBs Position 15:complement(65019477..65039390) Genome browser AA seq 542 aa AA seqDB search MSLLHCENSCGSSQSESDCCAAMAASACGTAAKDDSVSGAASTVTLSSSFMEEIQGYDVE FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP DNFAKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNFHIL KECPRRQVPCENCAVLMAFEDKAIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP VPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPAPQCTMPPYDSVP PTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDK VAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSA QRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAAVRQNHEEIMDAKPELLAFQ RPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDS GI NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacactgtgaaaacagctgcggatccagccagtccgagagcgactgctgc gccgccatggccgccagcgcctgtgggaccgcagcaaaagacgacagtgtgagcggggcg gccagcacggtgactctctccagctcctttatggaagagatccaggggtacgacgtggaa tttgacccacccctggaaagcaagtacgagtgccctatttgcttgatggctttgcgggaa gcagtgcagacaccttgcggccacaggttctgcaaagcctgcatcatcaaatcaataagg gatgcaggtcacaaatgtccagttgacaatgaaatacttctggaaaatcagctatttcct gacaattttgcaaaacgagagattctttctctgatggtgaaatgtccaaatgaaggttgt ttgcacaagatggaactgaggcatcttgaggagcatcaagcacactgtgagtttgctctt atgagttgtccacaatgccagcgtcccttccagaaatgccaccttaatttccatattctc aaggagtgtccaaggagacaggttccttgtgaaaactgtgctgtattaatggcatttgaa gataaagcgattcatgagcagaactgtcctttggcaaatgtcatctgtgaatactgcaat accatgctcatcagagaacagatgcccaatcactatgatctagactgtcctacagcccca gttccgtgcacattcagtgcttttggttgccatgaaaagatgcagaggaatcacttggca cgccacctgcaagagaacacccagtcgcatatgagaatgatggcccaggctgttcagact ttaagcctcgcagtggctcccgcacctcagtgcaccatgcctccgtatgactctgtccct cccacccggccttcctctgggcgtcactcagaagtccacaatttccaagaaaccattcaa cagttagagggtcgccttgtaagacaagaccatcaaatccgggaactgactgcgaaaatg gaaacccagagcatgtatgtaagtgagctcaagcgaactattcgaacccttgaggacaaa gttgctgaaatagaagcacagcagtgcaatgggatttacatctggaagattggcaacttt gggatgcacttgaaatcgcaagaagaggagaagcccgttgtcattcacagccccggattc tatactggcaaacccggctacaaactctgcatgcgcctgcacctgcagctgccaagcgca cagcgctgtgccaactacatatctctctttgtccacacgatgcaaggggagtacgacagc cacctgccttggcccttccagggaacgatccgccttacaatccttgatcagtctgaagca gctgtgaggcaaaaccatgaagaaataatggacgccaaaccagagctcctggcctttcag agacccaccatcccccggaaccccaagggttttggctacgtgacttttatgcatctggaa gccctcagacaaagaaccttcatcaaggatgacacgttattagtacgctgtgaggtctcc acccgcttcgacatgggcagtcttcggagggagggttttcagccacggagtactgactca gggatatag

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