Bartonella taylorii: LAJ60_02950
Help
Entry
LAJ60_02950 CDS
T08323
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
btay
Bartonella taylorii
Pathway
btay03030
DNA replication
btay03410
Base excision repair
btay03420
Nucleotide excision repair
btay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAJ60_02950 (ligA)
03410 Base excision repair
LAJ60_02950 (ligA)
03420 Nucleotide excision repair
LAJ60_02950 (ligA)
03430 Mismatch repair
LAJ60_02950 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btay03032
]
LAJ60_02950 (ligA)
03400 DNA repair and recombination proteins [BR:
btay03400
]
LAJ60_02950 (ligA)
Enzymes [BR:
btay01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
LAJ60_02950 (ligA)
DNA replication proteins [BR:
btay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAJ60_02950 (ligA)
DNA repair and recombination proteins [BR:
btay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
LAJ60_02950 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAJ60_02950 (ligA)
MMR (mismatch excision repair)
DNA ligase
LAJ60_02950 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LAJ60_02950 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
USP03406
UniProt:
A0A9Q8YYK9
LinkDB
All DBs
Position
complement(663225..665372)
Genome browser
AA seq
715 aa
AA seq
DB search
MNKDAIKNLTVLEAESELEWLAKEIARHDLLYNTNDQPEISDAEYDALRRRNAEIEAFFP
ELIREDSPSHRIGAPVSEKFEKSVHAQVMLSLDNAFSFEDVSEFIERVRRFLRLPETQIL
EITAEPKIDGLSLSLRYEKGRLVRAATRGDGYVGENVTANARTISDIPKILQGNFPDILE
VRGEVYMGREDFQELNMNQQGERKLAFANPRNAAAGSLRQLDSRITASRKLKFFAYAWGE
VSEMPAESQIGMMKKLREYGFIINPFTKVFKTLKEIISYYHDIEELRHSLSYDIDGIVYK
VNDLMLQVRLGFVSRSPRWAIAHKFPAEKAMALLEGIDIQVGRTGALTPVARLAPITVGG
VVITNASLHNEDYIKGIGHKGEPIREGRDIRVGDTVIVQRAGDVIPQIVDIVAAKRPKDA
SAFVFPHLCPACGSHAVREVGEAVRRCTGGLICPAQAIERIRHFVSRNAFDIEGLGKKQV
EFFFRVQDETLCIHTPADIFTLQRRQEKSLTRLENMEGFGTVSVRKLYDAINARRKIPLS
RFLFALGIRHVGEVNARRLARAYQNYFAFETAAMATIMPCDKENEQGNEAWIELTSIEGI
GPQVGSAIIDFYQEAHNREVLSVLLNEVTPLDEELVMTDSSPIAGKIIVFTGTLARMSRD
EAKALAERLGAKTSGSLSKKTDLLVAGIGAGSKLAKAQELGVEVIDEETWLQLIA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggatgcaattaaaaacttaactgttcttgaagcagaaagtgaattggagtgg
ttggcaaaagagattgcacgtcacgatctgctttacaatactaacgatcagcctgaaatt
tctgatgcagaatatgatgctcttcgtcggcggaatgcagaaattgaagctttttttcca
gagctcattcgtgaagattctccttcacatagaattggtgcaccggtttctgaaaagttt
gaaaaatctgttcatgcacaggtgatgctttctcttgataatgcatttagttttgaagat
gtcagtgaatttattgagcgcgttcgtcgttttttacgacttccagaaacacaaattttg
gaaataacggctgagccgaagattgatggtttatcgttatctttgcgttatgagaaagga
aggcttgtgcgggccgcaacacgtggtgatggatatgtaggtgaaaatgtcactgcgaat
gcgcgaacaatttctgatattccaaaaatattgcaaggtaattttcctgatattcttgag
gttcgtggtgaagtttatatgggacgggaggatttccaagagcttaatatgaatcaacag
ggagagagaaaattagcttttgctaatcctaggaatgctgcagcaggttcgctacgacag
cttgattcgcggataacagcaagtagaaagcttaaattttttgcttatgcttggggtgaa
gtaagtgaaatgccggcagaaagtcaaatagggatgatgaaaaagctaagagaatatggc
tttattatcaatccattcacaaaagtttttaagacattaaaagagattatttcatattat
catgatatcgaagagcttcgtcattccttaagttatgatattgatgggattgtttataaa
gttaatgatttgatgctacaggtgcgtttggggtttgtctctcgttcgccacgttgggca
attgcgcataaatttccagcagaaaaagctatggcgcttttggaaggcattgatattcaa
gtaggtcgaactggagcattaacccctgttgcgcgtcttgcacctattaccgttggtgga
gtggtgattaccaatgcaagtttgcataatgaggattatattaagggaattggtcataaa
ggagagccaattcgtgaagggcgtgatatacgtgtaggcgatacagtgattgtacagcgt
gctggtgatgtgatccctcaaattgttgatattgttgctgcaaagcgtccaaaagatgct
tctgcttttgtttttcctcacttatgtcccgcttgtgggagtcatgccgttcgtgaagtg
ggtgaagctgtgcgtcgatgcacaggggggcttatttgtcctgcacaagcgattgagcgt
attcgtcactttgtttcgcgtaatgcctttgatattgagggacttgggaaaaaacaggtg
gagttctttttccgtgttcaagacgagacgctttgtattcatacaccagctgatattttt
actttacaacggcgccaagaaaaatctttgacacgtttagaaaatatggaaggttttggt
actgtttcagttcgtaaactttatgatgccattaatgcgcgccgaaaaattcctttaagc
cgttttttgtttgcattaggaattcgtcatgttggtgaggttaatgcacgacgccttgcg
cgcgcctatcaaaattattttgctttcgagactgccgcaatggcaacgattatgccatgt
gataaggaaaatgaacaaggtaatgaggcttggatagagcttactagcatcgaaggaatc
ggaccacaggtagggagtgcaattattgatttttatcaagaagcacataaccgcgaggtt
ttgtctgtcttgttgaatgaagtaacgcctcttgatgaagaactcgtgatgacagattct
tcaccaatagcaggaaagataattgtttttacaggaactttggcacgaatgtcacgcgat
gaagcaaaagcgttagcagaacgattaggtgcaaagacttcaggttctctttctaaaaaa
acggatcttcttgttgcaggaattggggcaggatcgaagttagctaaagcacaagaatta
ggtgttgaggttatagatgaagagacttggctgcagttgattgcgtga
DBGET
integrated database retrieval system
