Bombus terrestris (buff-tailed bumblebee): 100642737
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Entry
100642737 CDS
T04364
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04512
ECM-receptor interaction
bter04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100642737
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100642737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bter00535
]
100642737
Proteoglycans [BR:
bter00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100642737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Laminin_G_2
Kazal_1
Kazal_CFAI
EGF_laminin
EGF
Laminin_G_3
hEGF
EB
Motif
Other DBs
NCBI-GeneID:
100642737
NCBI-ProteinID:
XP_012170656
UniProt:
A0A9C6SHT9
LinkDB
All DBs
Position
12:complement(5299906..5684080)
Genome browser
AA seq
2290 aa
AA seq
DB search
MRRTSSNGLKLDLTENTPGSSLSRLPNLVEHAETCQALSTGTGENLSSKLPNVVEGSMDY
GSERRSSRYLEYQDSKPYQDGQSASGLPPYEQGYHDQSSRGYRSYERKPYDREDIDRYDN
RIYPEDNLRYDRRGDQRTYQESDLDAPYERSDAQKLSRTYPTELQEAGGRRYSRDLTDYE
YASRYAEETLKLEPKKDHHHHHHSGKVYEPTPSKGYESGVKTHDSAYELSCAAQQDLSGR
KYESKYHSVSKMYGTLPRYETGKSYEPRSYEYEEQAYETGGKPYDSKYELTSSKSYERAK
YDGSSSSRYQDKSYDQTLKIGELGSSSSAAYARKTQDQEETNAEKMNGYRKNNFEAYGVY
SDPEDDHGFLAEKKTPQYPYKGVVVNVSGESSVIDQKRGKDGRQTEVVGNPWCRPTILLL
LLVLLVVIFVFVAGILLYLNYMSYKPQRPIIEGKDLNFASNNAEPCEKTYCSWGATCVVS
ENGKPLCQCPTDCPSTSEPVCGSDNMTYTNYCHLRKTSCLERKTTRVKNQGACEIKDPCA
KLNCTQGAQCVRSRDGSKASCECLESCPNLGDHEGSSPVCGTDGTDYPSLCELNKAACAK
GVNITVAFQGKCDPCGNVECVEPEICQLDDSRQPGCRCGEQCGLEFAPVCGSDGKTYSNE
CSLRQEACRSRLSLRKVYNGACSSGINPCDEAKCGPYEQCVINRQGIASCECGPECEPVM
RPVCARGGKTYTSLCELKRQACLTKTNIEVAYTGTCGSRGPCSEKICQWGAICAETGGTA
ICECPTCPAEFQPVCGDDGISYGNECKLRLEGCKHRREIRVLYQGLCNGCENKKCDFYAE
CESDSAGEAKCVCPSKCETTTKEPAQEKICGSNGITYANECSLKVASCTSQTDIAISYVG
DCELCARIECDHGAHCMAGVCVCPEECPESTGEPVCGSDAKTYPSECELQKAACGRDPKL
PVLHVIFYGDCGERFVAALTTMSTPAVVRLATTAVDVTSTQVREACKNINCDFEATCELG
PDDYPRCSCKFDCASISQENMRPVCGSDLRTYSSLCAMKMEACQRQQELRPRPLDLCQGM
EVKPCNGDPPLVDADGKEYDCGNGPERRDCPSNSYCHQTTRLARCCRKAQGTQVVKCSDS
WHGCCPDGKTAARGPNGAGCPSLCNCNRLGSVSDTCNPETGQCECKPGVGGLKCDRCMPG
YWGLPKISEGHQGCIPCGCSLFGSVREDCEQMTGRCVCKPDIQGQKCTICTDHNKILTPT
GCYSADTIPPIPTSCNELECYSGGQCSEIGGPHCVCPSSCPSDIPSVPVCGSDGQTYDNE
CELRLYACRHQADVVTQAFGHCRDDPMVNTDFPVKRYTAVQYTQPAAAISPLSKSTRHLL
VPEPDPRYYYTHRAHQETITIDRDNLKHGVAAAYRPTPATIRVVTALLGDLCTDDKDCTI
PNSECSNGGCICSEGYAETSDRQECFANYVPVTPTEEFRACLSYPCHATSTCIDLPSATF
VCICRPNYTGLLCDEEINKRDYEVPSFDGKSYVRMNRLKAYHKFSVEVEFKTYADNGIIL
YNQQKSDGTGDFVSLAIVDGHVQFRYNLGNGPVVLSSPERITMKTFHRVAAKRYHKDGVL
IFNDGEDVAGQSQGMLKSLDLNQDTFVGNMPTNYSKVYDNIGTNHGFLGCIRKLKINRNF
VDLHVGRDKEILETYRVKECGENACANLPCQNGATCQPIFEEDLCNGRECRRIQKRGKGK
NKNGMNIVRCKGSHCISIDQRRSKKNAKKRCAAPKCDYDYDIDYETSFEHGNYAVEKYDP
PDYRCICPPQFTGRNCEESLDPCIGEPCQHGATCDILPQGGYVCKCPPGRTGEHCEILDA
ELTELLIPEMSGDGFLELPCLEGVAKAFSIELWFLTHANDGLLLYNGQLNNGRGDFISLN
LVQGKLEFRFNLGSGIANITSPDPVTLDTWHCVRISRLGREGVLQLDDGTVARGLSGSPL
TELNLEMPLYVGGVKHWREVHRLAGAWTGLVGAVQRLMVNGKTYQNLAVNVTQHNTEIYD
GLPCPNNENPCHNGGVCLPLLNSYLCKCANGYNGLHCEFFMGYDVSTELSERPVRFKGDN
FLQFKHRNGRSTNSTNTTLGEYFEESYSDYDLEEDVDYDYDSYDYTERKGQQSNKFELRL
RTTHPDGLIAWVGRGKIEHLILSLHGGQVLLTYKSKSEQISLRSRERVDDGVFHHIRASR
RRRTSMIQIDDFTPVKVSTETTLLTTNGKLFVGGKPGHRGIKGCVSDFVVDKRRLQLNRR
KIEYCHDNDV
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggacgagcagcaacggtttgaagctcgacctgacggagaacacaccaggtagc
tcgttatcgaggctgcctaatttagtcgagcatgcggagacctgccaggcgttgtccacc
ggaaccggtgagaatttaagcagcaaattgccaaacgtggtcgaaggctcgatggactat
ggtagcgagcgtagatcctcccggtacctcgagtaccaagactctaagccgtatcaggat
ggccagtcggcatcggggttgcccccgtatgagcagggctaccacgatcagtcgagcaga
ggctacagaagctacgaacgaaagccatacgacagggaggatattgaccgatacgataac
agaatttatccagaggataacctgaggtacgatcgtcggggggatcaaagaacgtatcag
gagtcagacttggacgcgccgtacgagaggagcgatgcccagaagctcagcaggacttat
cctactgaacttcaggaggcaggtggtaggcgatactcgagagatttaacagattacgag
tacgcgtctaggtacgcggaagaaacgttgaagctcgagccgaagaaagatcaccatcac
catcatcattcgggcaaagtgtacgagccaactccgtcaaagggctatgaatccggggtg
aagacgcacgattctgcttacgagttgtcttgcgccgcgcagcaagacctttccggcaga
aaatacgaaagtaaatatcactctgtcagtaagatgtacgggacactgccgcgatacgaa
acgggtaaatcgtacgaacctagatcatacgagtacgaagaacaggcttacgaaaccggt
ggcaagccatacgactcaaagtatgagttgaccagctcgaagagttacgagagggccaag
tacgatggttcttcgtcctcgagatatcaagataaatcgtacgatcaaacgttgaagatc
ggtgaattgggctcctcttcgtctgctgcatacgctagaaagactcaggatcaagaggag
actaacgcggaaaagatgaacggatacaggaagaacaatttcgaggcgtacggcgtttac
tcggatcctgaggacgatcatggattcttggctgagaaaaagacgccacagtatccgtac
aagggcgtagtagtgaatgttagcggagagtcgagcgtcattgaccagaaacgtggcaag
gatggcaggcaaacggaagtcgtcgggaatccttggtgcaggcctaccatactgttactc
cttttggtccttcttgttgttatcttcgtgttcgtcgctggaattctactgtatctaaac
tacatgtcttacaagccgcagcgtcccattatcgagggtaaggatctaaatttcgccagt
aacaatgccgaaccttgtgaaaagacgtactgttcttggggtgcgacgtgcgttgtgtcg
gagaacgggaaacctttgtgccagtgtccaacagattgtccttcgacttctgaacctgtc
tgcggctccgacaacatgacctacaccaactattgccatctacggaaaaccagctgtctc
gagagaaaaactacacgggtgaagaatcaaggcgcctgtgaaatcaaggacccgtgtgcg
aaactaaattgtactcagggtgcgcaatgcgtacgaagcagagatggaagcaaagcttcc
tgtgaatgcttggaatcctgtccgaatttaggggatcacgaaggatcgagccctgtctgc
ggcacagatgggaccgactacccgtctctttgcgagttgaacaaggcagcttgcgcgaag
ggtgttaatatcacggtggcatttcaaggcaaatgcgatccttgcggtaacgtggagtgc
gtagaaccggaaatctgtcagctggacgactcgaggcaacctggctgtcgttgcggtgag
cagtgcggccttgagttcgcaccagtttgcggaagcgatggtaaaacatactcgaacgaa
tgcagcctcaggcaggaagcttgcagatcgagattatcgctcaggaaggtctacaatggc
gcatgcagctcgggaatcaatccgtgcgacgaggcgaaatgcggtccctacgaacagtgc
gtgatcaaccgacaagggatcgcgagctgcgagtgcggtccggaatgcgaacctgtgatg
agaccagtatgcgcgcggggtggcaaaacatatacatcgttgtgcgagctgaagagacag
gcctgtttaacgaagactaacatcgaggtcgcttacacgggaacctgtggctccaggggg
ccctgctccgagaagatctgtcagtggggcgcgatttgcgcggaaaccggtggcacagcg
atttgcgaatgtccaacctgtccggcagaatttcagccagtttgcggcgacgatggcatc
agctacggaaacgagtgtaagcttcgcctggagggctgtaaacatcgacgagagatccgc
gtgctttaccagggactctgcaatggatgcgagaataagaaatgcgacttttacgcggag
tgcgagagcgacagcgctggtgaagccaaatgcgtttgtcctagcaagtgtgagaccacg
acgaaagaacccgcacaggagaaaatttgcggctccaatggtataacttacgccaacgaa
tgctctttgaaggtggcctcttgcacttctcaaactgacatcgctattagttacgtaggc
gactgtgagctttgcgcaagaatagagtgcgatcatggagctcattgcatggctggcgtg
tgtgtgtgtcctgaagaatgtcctgagagcactggagaaccagtatgcggcagcgatgcc
aagacatacccgtcagagtgtgaattgcaaaaggctgcctgtggaagggatcctaaattg
ccggtcttgcacgtgatattctacggcgattgcggtgaacgattcgttgcagcactcacc
acgatgtcgacgcctgcggtggttcgattggccaccaccgcggttgacgtgaccagcact
caggtacgcgaagcatgcaagaacattaactgcgatttcgaggctacttgcgagctgggc
ccggacgattatcccaggtgcagctgcaaattcgactgcgcctcgatttcccaagaaaat
atgcgccccgtttgcggcagcgatctaaggacctattcgtccctctgtgccatgaaaatg
gaggcctgccagaggcagcaagagctaagacctagacctctcgatctttgccaaggtatg
gaagtgaaaccttgtaacggtgatcctccattggtggatgccgatgggaaagagtacgat
tgcggtaatggtccagaacgacgagattgtccgagcaacagttattgccatcagaccacg
cgactagctcgatgctgcagaaaagctcaaggaacccaagtcgtaaagtgctcagactcc
tggcatggctgctgtccggatggcaaaacggccgcacgcgggcccaatggcgcaggttgt
ccgagtttatgcaactgcaacaggttaggcagtgtttctgacacctgcaatccagaaacc
ggacaatgcgaatgcaaaccaggtgtaggcggtctgaaatgcgatagatgtatgcctggt
tattggggtttgcctaaaatcagcgagggacatcaaggatgtataccatgcggctgctcg
ctctttggttccgttagagaagactgcgaacaaatgacaggtcgctgcgtttgcaaaccg
gatatccagggccagaaatgtaccatttgcaccgatcacaacaagatattaacacctaca
gggtgctactcagccgatacgataccgccgatcccgacgtcttgcaacgagctggaatgc
tattccggcgggcagtgttcggaaatcggtggaccgcactgtgtttgtccgtcgtcctgt
ccatcggacataccgtctgtgccggtttgcggtagtgacggacagacatacgacaacgag
tgtgagctcaggctgtacgcttgtcgccatcaagcagacgtggtcacacaggccttcggc
cactgcagagacgatcccatggtgaatacggacttccccgttaaaaggtatacagcagtg
caatatacccaaccagcagccgccatttctccgttatcgaaatctaccaggcatctgttg
gtgccggaaccggatcctcgctattattacacccacagggcgcatcaagaaaccatcacg
atcgacagggacaatttaaagcacggagtggctgcagcgtatagaccaaccccagcgacg
attcgcgtggtcaccgcgttgctcggcgacctctgtaccgacgacaaggattgcaccatt
cctaacagcgaatgctccaatggaggttgcatttgctcagaaggatacgcggaaaccagc
gacagacaggaatgttttgctaattacgtgcctgttacaccgaccgaagaatttcgtgcc
tgcttgtcgtatccgtgtcacgcgacatcgacatgcatcgatctgccgagcgcaacgttc
gtttgcatctgtcgtccaaattacaccggtctattatgcgacgaggagatcaacaaaagg
gattacgaggtgccgtcgttcgacggcaagagctacgtcaggatgaacagattgaaggct
taccacaagttcagcgtcgaggttgagttcaagacgtacgctgacaacgggattatactt
tacaaccaacagaagagcgacggcaccggggatttcgtctcgttagccatcgtcgacgga
cacgtacagtttcgatacaatttaggcaatggccctgtagttctttcctcgcctgaaaga
attactatgaaaacgtttcatcgagttgccgcgaaaagatatcacaaggacggcgtttta
attttcaacgatggggaagatgttgctggtcaaagtcaaggaatgttaaagtcgctcgat
ctcaaccaagatacgttcgtcgggaacatgcctaccaattattctaaggtttacgacaat
atcggtaccaaccatgggttcctcggttgcatacgaaaattgaaaatcaatcggaatttc
gtcgatcttcatgtcggccgtgataaagagatcttggagacttatcgcgttaaagagtgc
ggagagaacgcgtgtgccaatctgccttgccaaaacggcgcaacatgtcagcccatcttc
gaggaagatctctgcaacggtcgcgagtgcagaagaattcagaaacgagggaaaggtaaa
aacaagaatggcatgaacatcgtgagatgcaagggatcgcactgcatctcgatcgatcaa
cgcagatcgaagaaaaacgcgaagaaacgttgcgcggcacccaagtgcgattacgattac
gacatcgattacgagacgagcttcgaacatggcaattatgcagtggagaaatacgatccg
cctgattatagatgcatctgtccacctcagttcactggcagaaattgcgaagagtcttta
gatccttgtataggcgaaccttgtcagcatggagccacctgtgatattcttccacaaggt
ggttacgtttgcaagtgtccacctggcaggactggagaacactgtgaaatcctcgacgct
gagttaacagagctgttgatacctgaaatgtccggggacggtttcttggaactcccatgc
ttggaaggtgtagcgaaagcgttctccatcgaattatggtttctcacgcatgccaacgac
ggtttgctactttacaatggccagttgaacaacggacgtggtgatttcattagtttgaac
ttggtccagggcaaactggagtttagattcaatcttggaagtggtattgccaatattacc
tccccagaccctgttacgctcgacacgtggcattgtgttcgaatcagcagattaggcaga
gaaggagttcttcaattagacgacggaactgttgccagaggactgtccggaagtccgtta
acggaactgaatctcgaaatgcctctttacgttggcggcgttaaacattggcgagaagtt
catcgactcgctggagcctggactggattggtaggcgcggtacaaagactgatggtgaat
ggaaaaacgtaccaaaatttagctgtcaacgttactcaacataacacggaaatctatgat
ggtctaccatgtcctaacaacgagaacccttgtcacaatggtggagtatgtttacctctg
ttaaacagttatctgtgtaaatgtgcgaacggttacaatggtctccactgtgaatttttc
atgggctacgatgtatccacggaattatccgaaaggccagtgcgtttcaagggcgacaat
ttcttgcaatttaagcaccgaaatggaagaagtactaactcaactaatactaccctcggc
gagtactttgaggagtcctactccgactacgacttggaggaggatgtcgactacgattac
gacagttacgattacacggaacgcaagggtcagcagtcgaataaatttgagctgagactg
agaacaacgcatccggatggcttgattgcctgggttggaagaggcaaaatcgaacatctt
attttatcgttacacggcggccaagttcttcttacgtacaagagcaagagcgagcagata
tcattgaggagcagggaacgggtggacgatggtgttttccaccatatcagggcatctaga
agacgaaggacgtcgatgatacagatcgacgatttcactccggtgaaagtatctacagag
accaccctgttaacgacaaacggcaagctgttcgtcggtggaaaacccggtcatcgaggc
atcaaaggctgcgtgtcagacttcgtagtggataaacgacgtcttcagctgaacaggcgg
aagatcgagtactgtcacgacaacgatgtatga
DBGET
integrated database retrieval system
