Bombus terrestris (buff-tailed bumblebee): 100648953
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Entry
100648953 CDS
T04364
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100648953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100648953
Spliceosome [BR:
bter03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100648953
Complex C
U5 SnRNP specific factors
100648953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
100648953
NCBI-ProteinID:
XP_003400227
UniProt:
A0A9B0C2B2
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All DBs
Position
LG B13:6320807..6325392
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AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASDSEDENEYGNAGDDAEDRERSDEEMEEDRDEVREQSEQGNS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRRPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVRQTHPYLHSVTDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAVLIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYS
DSENPSFVSPAIGNVCFASSEYNVCFTLKSFAALYAKIHPSLNANEFSKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVAHVPSPQSHAPVKVQHVYTGSMDSSLAQDMINCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELNRVPAGNWVLIEGIDRPIVKTSTITDLSNSDDLHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVKITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLNSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatctatacgatgaatttggcaattatattggtcctgatttggcttctgat
agcgaagatgaaaatgaatatggaaatgctggagatgatgcagaagacagagaacgttcc
gatgaggaaatggaagaagacagagatgaagttagagaacaatcggagcaaggaaattcc
atggcagttgtattgcacgaagataaaagatattatccaagtgctttagaagtttatggg
ccagaggtagagacattggtacaagaagaagatgcacagccattagataaaccactgata
gcaccaacacgaagaccaaagtttcaaataaaacaacagcaactaccagagacaacgtat
agcatagaatttttagcagatatgatggatgcacctcaccttatacgtaatgttgttcta
cttggtcacctacatcatggcaaaactactttagtcgattgtttagtgagacagacccac
ccctatcttcacagcgtaacagacgaaaaacctttaaggtataccgacacattattcacc
gagcaacaacgaggagtatcgacgaaagcaacacccgtaacgttgttactgcaagacgta
aaatcaaagtcctaccttttgaatatattcgatactccgggtcacgtaaatttttctgac
gaggcgacagcggcgatacgtttatccgatggagcggtgctgatcgtcgacgccgccgaa
ggcgtcatgttgaacacagaacgtttactaaaacacgcgcttcaggaaaaacttgcgtta
acagtttgtataaataagatagaccgactgatcctcgaactaaaattgccccccttagac
gcgtactataaattaagacatatcatcgaagaaattaatggactgatagcgctatattcg
gattctgaaaatccatctttcgtctcacctgcaatcggaaacgtgtgctttgcgagctcg
gagtacaatgtctgtttcaccctgaaatctttcgcggcgctttacgctaagatccatccc
tcgcttaacgccaatgaattttcaaaacgactatggggagatatatactttaactcgaaa
acacggaaatttacgaaaaaaccgccacacaataccgcacagcgcagctttattgaattc
attctcgagccattgtacaagatcttcgcgcaagttgtcggcgatgttgacacaacttta
cccgatgtactggacgaattaggcataagactaacatcagaagaaatgaaaatgaatatt
agacctctgttgagattggtatgcacgcgtttcttgggagacatgtgcggattagtcgat
atgtgtgtggcccacgttcctagtcctcagtcacacgcaccggtcaaagttcaacacgtg
tacacaggctctatggattcgtctctcgcgcaggatatgatcaattgcgaccctgacggc
aggctaatgattcacagcacaaaaatgtatcctaccgaggactgtactctattcgtggtc
ctcggaagggtaatgtcaggtacactcgaggcaggacaacgtgtccgcgtattaggtgaa
gcatactcgcgtaccgacgaagaagattctcgcgttttaaccgtgggaagattatggatt
agcgaggcacgctactcgatcgagctgaacagagttcccgcgggcaactgggtacttatc
gaaggtatagacaggccgatcgtaaaaacgagcaccattaccgatctcagtaattcagac
gacttacatatcttccgaccattgaagttcaatactcagagcgtgatcaaaatcgcggtc
gaacctgtcaatccatcagagttaccaaaaatgttagacggcctgaggaaagtgaataaa
agttatccattgctgggcacgcgagtcgaggagagcggcgaacacgtggtcctaggcacc
ggtgaattgtacttggactgcgcgatgcacgacctgcgtcgtatgtattcggaaatcgat
ataaaagtagcagacccggtcgttgctttcgcggagacggtagtagaaacgagttctctc
aagtgtttcgccgagacacccaataaacggaacaagttgacgatgatcgccgaaccactc
gagagaggcctggccgaagacatcgaggcggaacacgttaaaatcacgtggaacaaaaaa
cgtctaggagaatttttccagacgaagtacgactgggatttattggcggcgcgaagcata
tgggcgtttggtccagacgccacgggtcctaatattctggtcgacgatactttgccatcg
gaagtagataagacgttattgaacagcgcccgtgacgccatcattcagggtttccagtgg
ggtacgcgagaaggtcctctctgcgaagaaccgattcgaaacgtcaagttcaaaatcctg
gacgccgtgattgctcaagaacctcttcatcgaggaggtggtcagataattccgacggcc
agaagggtagcctattctgccttccttatggcaacgcccagattgatggaaccctacttg
ttcgtcgaagttcaagcgcctgcggattgcgtgtcagcagtttataccgtgctggctaaa
agaaggggccacgtgactcaagacgctcccgttcccggaagtcccttgtataccatcaaa
gcattcatcccggcaatcgatagtttcggattcgaaactgacctgcgaacccatacgcaa
ggccaggcgttctgcctgtccgtattccaccattggcagatcgtgcctggcgatccatta
gacaaaagcatcacaattcgaccactggagccacagccagctacgcacttagctagagag
tttatgttgaagacaaggaggcgaaagggactttcggaagacgtgtctatcaacaaattc
ttcgacgatcctatgttactggaattagcccggcaggacgttctattgaattacccgtta
taa
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