Bombus terrestris (buff-tailed bumblebee): 100651019
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Entry
100651019 CDS
T04364
Name
(RefSeq) cadherin-99C isoform X1
KO
K16500
protocadherin-15
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bter03037
]
100651019
04515 Cell adhesion molecules [BR:
bter04515
]
100651019
Cilium and associated proteins [BR:
bter03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100651019
Cell adhesion molecules [BR:
bter04515
]
Cadherins
Protocadherins
100651019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
100651019
NCBI-ProteinID:
XP_012172001
UniProt:
A0A9B2JND1
LinkDB
All DBs
Position
15:122042..196080
Genome browser
AA seq
1581 aa
AA seq
DB search
MARTTTAWFCCLLCVFLCLRNVTSKAGLCEVESGQSNIILDIEESRGDAIDQKTVPEELP
VSGDPYNETTLELIFPGRQPRFKLNGKKLQLLDPLDRDDENLSHVVFQLSCTVKQTNKKR
TIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP
GDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYLVTILASDRA
RNVSERFTSTTTLTVNIRDDDDQDPSFIYQGCMLLDGACINPEYSASVSSGVLSGILNIS
PEKIQAVDMDSINAPIHYSFLSGNPSNYREFFEINPNTGAVKQIKAVDTTVTKKFDIIIK
AVEVSEAKRSATAKLTITVKPVDSNPPIITASNIEGFVDENAPIGTKVIDKIGNPVVLTV
SDADLGPEDPKPAYTFELTTNFFAIDPSGILVVNEENLDRDPPSPGRFRFQVVAREKTGV
AASAPLSFVVILNDVNDNAPMLPMIAPITVQAGETKKVVTKVEATDNDEGENAEITYSIY
HVSNNGLHKFKIDPKTGLIESVRKLNAGEQFSITVQATDKGGKYSQTIVEVNVIPGPNTR
SPVFQQPVYEVQVSEGASINSTVATITAVDPENDPVSYSIVSGNDLRQFAIGDKSGVITV
IRKLDREDLTRYQLLIKAEDSGGLFNTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARK
LIGRVHAEDADEGINAEITYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEYKFVVTARDG
APDYRLATATVTVKVIDVEDEVPVFHQSSYEARVKENIPDFTVLQVTADDPDTKKQITYM
IKQGNTELFDIDPKTGAIKTVRGLDYERENQHILIIGTVENTSDSPGSTTRVVVNVQDVN
DIPPVFTSVPRPITLDDDVPIGTTVINLIATDSDGTAPGNQVRYEIVGREIANKYFVIDP
DTGVLRIRDDLRKETNTEYQVDVRAYDMGEPQLASVTTVPVYVRHVATVPPEIGLGFAEN
SYNVEVPEDAGDDTLIKIITVINSHAHDTTPLKCEIYSGNEKELFEANVTEERNCALKLR
KGVLDYETTESYQVKLKLESLSGLLNTDRNTTMVKIQVLDVNDNKPEFIFADSRAKLSRG
RYFAAIPRTAQFASTVIQVKAHDKDNGKYGKLEYKILGGRGSDYFAMDSSSGIIRTTATF
DNVDLSELPFKFDVRVRDNPNSTDNFNSIVAPVIVNLIEEENLMILVVQDAPPDALQKEA
SKIAGIIEEKSGLLIGIDRVAVRKNLTKNGTVEMYPQDSDVWFYAIDPDTEAILDRNSSR
IQRSIIEKTAMSNITFDVSTLVRANAIDIHAPVMPAESVRTQTAIAFSGEVFPYALIIIA
CVILILGIAGIIYICVSWSRYKAYKERMQRMYVVPRYDPVYVEPNLKEYETQVLQMSVPV
DDNDSYNDLQLDFSNKNHAFSLDNVSYITKDHGESTGQQSPVSSEAATTARASSIVGTHG
ETNIHSLRRSTLGRKNHSSNANTLNNHDTTPVLNPLYSHGNDLLSPSPSNDNVTFREKRD
YSHLGFTYLGEQSPVETTTEL
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggacaacgactgcgtggttttgctgcttactctgcgtgtttttatgccttcgt
aacgtcacttcgaaagctggcttgtgcgaggtagagtcaggacaatcgaatatcattctt
gacatcgaggagagcagaggagatgcgatcgatcagaagaccgtgccggaggaacttccg
gtatctggcgatccgtataacgagaccacgctggagttgatctttcctggaagacagcct
cgttttaaactgaatggaaagaaactgcagctgttggatcctctggatagggacgatgaa
aatctctcgcacgttgtttttcagttaagctgtacggtgaagcaaacgaacaagaaacgg
accataccggtgattgtgcgagtgtcagatataaacgacaatgcgccgaaattcattaac
acgccatacgagacaacggtgccagagttaactccagttggttcgaccatcttcaaaaac
gtggtggccgtggacgcggatgccggtgtaaacggcatcgtggaatactcgatcgctcct
ggtgacggaaccggcattggcaacaatgacggagttggtcgaaatagaataacaacggcc
gatggatacggttatttcagcattaacttacctcatcaaggccaagttactgttaaccgt
accttggattttgaaagaacgcaacgatacctcgtcactattttggcatcggatcgtgca
aggaacgtatccgagaggttcacatctaccaccaccttgacggtaaatatcagagacgac
gatgatcaagatccttccttcatctatcaaggttgtatgttgttggatggcgcctgcatt
aatccagaatattcggcatccgtatcgagtggagtgttatccgggatacttaatatatcg
ccggagaaaatacaagcggttgatatggacagtataaacgcacccattcattactcgttt
ctcagtggcaatccatcgaattatcgagaatttttcgaaataaacccaaacactggcgcc
gtgaagcaaatcaaggcggtcgacacaacggttaccaagaagttcgatatcatcatcaag
gctgtcgaggtgtcggaagcgaaacgatcggccacagcgaaattgaccatcactgtgaag
ccagtcgacagtaaccccccgattataacggcatcgaacatagagggtttcgtcgatgag
aatgcgccgattggaacaaaggttatcgacaaaataggcaatcctgtggtactcactgtt
tcggacgctgatttggggcccgaagatccgaaaccagcttacactttcgaattaactacc
aatttcttcgcgatcgatccttccggtatactcgtcgtgaacgaagagaatctggatcgt
gatcctccgagtcctggtcgtttccggtttcaagtggtggccagagaaaagacgggcgtt
gctgcatccgcgccattatccttcgtggtgatattgaacgacgttaacgacaacgcacct
atgcttcctatgatagctcccatcaccgttcaggctggagaaacaaagaaagtagtgaca
aaggtggaggcaacggataacgacgaaggggagaatgccgaaataacgtacagcatctat
cacgtgtcgaataacggactacataagtttaaaatcgatccgaagaccggcctaatcgaa
tccgtgagaaagctgaacgcgggcgaacaattcagcattaccgtacaagctactgacaag
ggtggaaaatattcacagacgatcgtcgaggtaaacgtgattcctggacccaataccagg
agtcccgtcttccagcaaccggtatacgaggtgcaagtcagcgagggagcttccattaat
tccacggtcgcgacgattaccgcagttgacccagagaacgatccagtgtcgtactcgatc
gtatcgggaaacgatctgcgtcaatttgcgatcggtgacaaatcaggcgtgatcactgtt
ataaggaagttggacagggaggatctgacccgttatcagctgctgataaaggctgaagat
tctggcggtttgttcaacacggcaacggtaaacatcaaagtaacggacatcaacgacaag
aatccagaattcgtcgacttgccttacgagtttactgtgaaagaaggagaagctaggaaa
ttaataggtcgggtgcatgctgaagatgccgatgaaggcatcaacgcagaaatcacgtat
ttcgcgccggacgacataccgttcaccgtcgatcctgaaactggagatgtgttgacgaaa
atcgttttggactatgagcaaaatgatgaatacaaatttgtggtaacggcgagagacggc
gctcctgattaccgcttagctactgctacggttacagtgaaagttatagatgtcgaggac
gaagttcctgttttccatcaaagcagctacgaggctcgagttaaagagaatataccagat
ttcacggtgcttcaagtaacggctgatgatccggatacaaagaagcaaatcacgtacatg
attaaacaagggaacaccgaactattcgacatagacccgaagaccggagccataaaaacc
gttcgcggcttggactatgagagggagaaccagcatatccttataattggcaccgtcgaa
aataccagcgattcgcctggttctactacgagagtcgtggtcaatgtccaggacgttaac
gacattccaccagtgttcacgtcagttcctcgtccgattacgctggatgacgacgttccc
attggcacgacggtcattaatctcatagcaacagattccgatggcactgctcctggaaat
caagtgagatacgaaattgtcggccgtgaaatagcgaacaaatattttgtgatcgatccg
gacactggcgtgcttaggatacgagacgacttgcgcaaggaaacgaacactgaatatcag
gttgatgttcgcgcgtacgacatgggagaaccgcaattggcgtctgtcacgacagtgcca
gtttatgttcgtcacgtggccacggtgccgccagaaatcggcttaggttttgcagaaaat
tcctacaacgtcgaagtgccggaagatgcgggcgacgatacgttgatcaagataatcacg
gtgattaacagtcacgcacacgatactacgccgttaaaatgcgaaatttatagcggtaac
gagaaggaattgttcgaggcgaatgttacggaggaacggaattgcgcgcttaaactcagg
aaaggagtcttggattacgaaacaacggaatcctaccaagtgaaacttaagttggaatct
ttatccggtctattgaataccgacaggaatacaacgatggtaaagattcaagtgctcgac
gtaaacgacaataaaccggagttcattttcgcggacagcagagcaaaactatcgagagga
cgttacttcgctgcgattccccgaaccgcccagttcgcgtcgacggttatacaagtgaaa
gcacacgataaggataacggaaagtacgggaaactcgagtacaaaatactcggtggacga
ggatcggactacttcgccatggacagttcttccggaataataagaaccaccgcgactttc
gataacgtggatctgtccgagcttccattcaaattcgacgttcgagttcgagataatcct
aattcgacggacaactttaactcgatcgtagctccggttatagtgaatctgatcgaagag
gagaatctaatgattctagtagttcaggacgcgccaccagacgcgttgcaaaaggaagca
tccaagatcgctggtatcatcgaggagaagagcggtcttctgatcggcatcgatagagta
gcagtgagaaaaaatttgacgaagaatggaaccgtcgagatgtaccctcaagattccgac
gtgtggttctacgcgatcgatccagatacagaagctattttagataggaacagttcgcgt
atacaaagatcgattatcgagaaaacggctatgtcgaatatcacgttcgacgtgtcgacg
ctggtccgagcgaacgcgatagacattcacgcgccagtaatgccagccgagtcggtacgc
acgcaaaccgccatcgctttcagcggcgaggtatttccgtatgccttgataatcatcgcg
tgcgtcatcttgatcctgggcatagctggcatcatctatatatgcgtctcctggtccaga
tacaaagcgtacaaggaacgaatgcagcggatgtacgtcgtgccccgttacgatcctgtg
tacgtcgagccaaatttgaaagaatacgagacacaggtgcttcaaatgagcgtgcctgtc
gacgacaacgacagctataacgatctccagcttgatttcagcaataagaatcacgcgttc
agcttggacaatgttagctatattaccaaagatcacggagaaagtaccggtcaacagagc
cctgtaagttcggaagcggcgaccacagcacgcgcttccagcatagtcggtacccacgga
gagacgaacattcactcattgcgacgatcgacccttggtagaaagaatcatagcagcaac
gcgaacacgttgaacaaccacgacacgacgcctgtcttaaatccactctacagtcacggt
aacgatctactcagtcctagtccgtcgaacgataacgtcacgttcagagaaaagagggat
tattctcatctaggattcacgtacttgggtgaacaaagcccggtagaaacgaccacggag
ttataa
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