Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1867
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Entry
MS2017_1867 CDS
T07716
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg00300
Lysine biosynthesis
bthg00550
Peptidoglycan biosynthesis
bthg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MS2017_1867
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MS2017_1867
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bthg01011
]
MS2017_1867
Enzymes [BR:
bthg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
MS2017_1867
Peptidoglycan biosynthesis and degradation proteins [BR:
bthg01011
]
Precursor biosynthesis
Amino acid ligase
MS2017_1867
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
WIYLD
Motif
Other DBs
NCBI-ProteinID:
AYQ57540
UniProt:
A0A1J5UH41
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All DBs
Position
2537687..2539081
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AA seq
464 aa
AA seq
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MNIKQLLHNITSTEFNFAVAGLCLNSQQVQEGDVFIALQGRSTHGIQHINQAIENGCIAV
LIDSKDIECRVPAIRIDDLGLHLPVLAKQMYGEALNVEIIGITGTNGKTSVACFISQLLT
LLGVKNGLIGTLGIGQSEQYSQHTTPDILTLYRTLAGYFKNGIKTAVLEVSSHGIDQDRI
AGLNLTHAVLTNLTQDHLDYHQNLSAYQSTKARLFSLASVTTTILNRDDEHYVNFLEVAK
GKKIIDFGLDDFDDIKPTEQGFLVTLQDYVFEVPFLGEYNLSNILAAFNTLKAYGFDIEK
IIPLLHKLTPPLGRMQKIDNHLVWIDYAHTPDAIENTITSLQKHYPNFKIRLVFGCGGNR
DQDKRAKMGKIASKLADTLILTNDNPRNENPRAIIDDILNGIDDSYEVDITLDRQLAIET
AITTLGENECLLIAGKGHETTQQFKDNIVDLNDIQIAQNILKSS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaacaactgcttcacaacattacctcaactgagttcaactttgccgtagca
ggattgtgcctcaactcacaacaagtacaagaaggcgatgtatttattgccctacaaggg
cgctcaactcatggcattcagcacattaaccaagccattgaaaacggctgtattgctgtg
ttgattgactcaaaagacattgagtgtcgtgtgcctgctattcgtattgacgatttagga
ctgcacttacctgttctggcaaaacaaatgtatggtgaagcactaaatgtagagataatc
ggcattactggcacaaatggcaaaacctcagtggcttgttttatctcgcaattgctcact
ttattaggggttaaaaatgggttgattggcacactgggtattggtcaatctgagcaatat
tctcagcacaccacacccgatattctcacactctaccgcacacttgctgggtattttaaa
aatggcataaaaaccgctgtattagaagtgtcatcacatggcattgatcaagacagaatt
gcaggtctcaacctcacacatgcagtgcttaccaacctcacgcaagaccacttagattac
caccaaaatcttagcgcctatcaaagtactaaggcacgattattctcactagccagtgtt
actaccactattcttaatcgagacgatgaacattatgtcaattttttagaagtggcaaaa
ggcaagaaaatcatcgactttggtttagatgattttgacgacatcaaacctaccgaacaa
ggttttttggtcacactacaagattatgtttttgaggtacctttcttaggtgaatacaat
ttatcaaatatcttggctgcctttaacacgcttaaagcctatggatttgacattgaaaaa
atcatccccctactacacaaactcacgccaccactaggcagaatgcagaaaatagacaac
catttggtgtggatagactacgcccacacaccagatgccatcgaaaacaccatcacttca
ctgcaaaaacactatccaaactttaaaattcgcctggtatttggttgcggtggcaatcga
gatcaagacaaacgcgcaaaaatgggcaaaattgcctcaaaattagcagacacccttatt
ttaaccaacgataacccacgcaatgaaaacccgcgtgccattattgacgacatcttgaat
ggtattgacgacagttatgaagtggacatcaccttagacagacaacttgccattgaaact
gccatcaccaccttgggcgaaaatgaatgcctgctcatcgctggcaaaggacatgaaacc
acacaacaatttaaagacaatatcgttgatttaaatgatattcaaattgcccaaaacatt
cttaaatcttcttga
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