Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch0284
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Entry
H175_ch0284 CDS
T02474
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03030
DNA replication
btht03410
Base excision repair
btht03420
Nucleotide excision repair
btht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H175_ch0284
03410 Base excision repair
H175_ch0284
03420 Nucleotide excision repair
H175_ch0284
03430 Mismatch repair
H175_ch0284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btht03032
]
H175_ch0284
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch0284
Enzymes [BR:
btht01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H175_ch0284
DNA replication proteins [BR:
btht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H175_ch0284
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H175_ch0284
NER (nucleotide excision repair)
GGR (global genome repair) factors
H175_ch0284
MMR (mismatch excision repair)
DNA ligase
H175_ch0284
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H175_ch0284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
RNA_pol_A_CTD
Nlig-Ia
HHH
PTCB-BRCT
BRCT_2
5_3_exonuc
HHH_3
DUF5395
Motif
Other DBs
NCBI-ProteinID:
AGF98997
LinkDB
All DBs
Position
326662..328671
Genome browser
AA seq
669 aa
AA seq
DB search
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP
SVRVGGTILDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDGANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTIPSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVIFDKRTGEEEEYRMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYALTKEQLLQ
LERFGEKSATNLIQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDELVKATEE
ELKAINEIGEKMAQSVVTYFDNEDVLELLQQFKEYGVNMTYKGIKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagatagcaaaaaaacgtatagaagaactgcgtgatttgttaaatacattt
aattatcaatatcacgtattagacaatccttctgtttctgatgcggaatatgaccgtgat
atgcaggagcttataaaattagaagcagagaacccagagtttatgagtgaagattctccc
tccgttcgcgttgggggaactattcttgatatatttgaaaaagtaacacataagtcacca
atgttaagtttagggaatgcatttaacgaaggggatttgcgtgatttcgacagaagagta
cgtcaaggaattgatggtgcgaatgtaagatatatatgtgaattaaaaattgacgggctt
gccgtttcgcttcattatgaaaaaggacgcttcattcaaggggcgacacgtggtgatggt
gtaacgggtgaagatattactcaaaatttaaaaacgattaaagctatcccacttcgttta
aatgaagaagtaacgttagaagcacgaggcgaagcttatatgccgaagcgttcattcgtt
aaactaaatgaagaaaaagagcaaaatggagaagatgtatttgcgaatccgcgtaatgca
gcagcaggttcaatacgtcaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtgtacggtcttgcgaatgtagaagaaaaaacaattccatcgcacagtgaatcgctt
gatttcttaggtgaactcggatttaagacaaatccaaatcgccgtacatgtgaaacaatc
gaagaggttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgatggaatcgttataaaagtagatgatgttgctcttcaagaaagtctaggaactaca
gcgaagagtccacgatgggcgattgcttataaattcccagctgaagaagttgtaacgaga
ctaacaggcattgaattaagtgttggccgaacaggggttgtaacgccgactgcagagcta
gagccagtgagagttgctggtacgattgttcgccgtgcttctttacataacgaagatttg
attcgtgaaaaagacattcgaattggtgactacgttgttgtgaagaaggctggagatatt
attcctgaagttgtgaacgttatttttgataagcgtactggtgaagaagaagaataccgt
atgccaacgcattgtccagcatgtgagagtgaacttgttcgtttagaagaagaagtagca
cttcgatgtataaatccgacttgtccggctcaaattcgagagggattaatccatttcgtt
tcaagaaatgcgatgaatattgatggacttggagaacgtgtcattacacaactctttgat
gcagattatattcgtacatttgctgatttatatgcattgacgaaagagcaattattacag
ttagaacgttttggtgaaaaatcagcaacaaacttaatacaagcaattgaaaattctaaa
gaaaactcgttagagcgattattatttggtcttggaattcgccacgttggagcgaaagca
gcacgtacatttgcagagcactttgaaacgatggatgagcttgtaaaagcaacagaagaa
gaactaaaagcaattaatgaaattggcgaaaaaatggctcaatctgttgtgacatatttt
gataatgaagatgtattagaattattacagcagtttaaagagtatggcgtgaatatgaca
tacaaaggtataaaaattgcagatttacaaaatgttgaatcttacttcgcaggaaaaacg
gttgttttaacaggtaagctagaagttatgggacgaagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaagagtacggatttggttgttgcaggt
gaagcagctggttcgaaattagcacaagcggagaaacataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa
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