Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_15280
Help
Entry
F543_15280 CDS
T03018
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btrh03009
]
F543_15280
Enzymes [BR:
btrh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
F543_15280
Ribosome biogenesis [BR:
btrh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F543_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_12
Methyltransf_25
Methyltransf_4
Methyltransf_32
Cons_hypoth95
UPF0020
Methyltransf_15
PALP
Motif
Other DBs
NCBI-ProteinID:
AHG84392
LinkDB
All DBs
Position
complement(1546177..1547292)
Genome browser
AA seq
371 aa
AA seq
DB search
MDKSYPAQINDKVADLKRLISPFILQKTQVFPPLVSSASAFRNKAKMVVSGSVERPLLGI
LREQTDTSSAVDLTDCPLYPSEFVALFPVLKDFIARAGLVPYNVAKKKGELKYILLTQSQ
LDKAVMIRFVLRSELKLPLIEREFADFWAKLPMNSVVSVNIQPQHAAILEGEKEIFLTER
RVLAENFNGIPLFIRPQGFFQTNPMVASELYRTAQNWVAQLPIQRLWDLFCGVGGFGLHC
AASLQQKNPEVALTGIEISASAIASATQSAEQLGLKNVQFASLDSANFALNKQGEHPDLI
IVNPPRRGIGKSLADYLNQLAAPYLIYSSCNAQTMAKDFASLTNYQLEKVQLFDMFPHTS
HYEVLTFLTLK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaagttatccagcgcaaatcaatgacaaagttgcagatctcaagcgcttgatt
tcgccttttattttgcaaaaaacacaggtttttccaccgcttgtttcatcagcctctgct
tttcgtaataaagctaaaatggtggtatcaggaagtgtagagagacctcttttagggatc
ttacgagaacagactgatacatctagtgcagtggatttaaccgattgccctttatatcca
agcgaatttgtcgcactttttcctgtcttgaaagattttatcgcgagagcagggctggtg
ccgtataacgtagcgaagaaaaaaggggagcttaagtatattttacttacccaaagtcag
ctagataaagcggttatgatccgttttgtgttgcgtagtgaattgaaattgccattgatt
gagcgagagtttgctgacttttgggcaaaactgccgatgaattctgttgttagcgtaaat
attcagccacaacacgcagcgattttggaaggtgagaaagagatttttttaacagagaga
cgagtattagcggagaattttaacggtattccactttttattcgcccgcagggttttttc
caaacaaacccaatggtggcgagtgagttatatcgaactgctcaaaattgggttgcgcag
ttaccaatacaacgtttatgggatcttttttgtggcgtcggtggttttggcttacattgt
gcggccagtttgcaacagaaaaatcctgaggttgcattaactggcattgagatttctgct
tcagcaattgccagtgctactcaatcagctgaacaattagggttgaaaaatgtacagttt
gctagcttggattctgcaaattttgccttaaataaacaaggggagcatcctgatttaatc
attgttaatccgcctcgccgggggattggtaaatccttagcggactatctgaatcagctt
gctgcgccttatttgatttattccagctgtaatgctcaaacgatggcaaaagactttgct
agtttaaccaactatcagctggaaaaagtacaattatttgatatgtttccgcacacctcg
cattatgaagttttaactttcttaacacttaaataa
DBGET
integrated database retrieval system
