Bordetella trematum: SAMEA390648700543
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Entry
SAMEA390648700543 CDS
T04322
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
btrm
Bordetella trematum
Pathway
btrm00540
Lipopolysaccharide biosynthesis
btrm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA390648700543 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
SAMEA390648700543 (lpxC)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SAMEA390648700543 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
Lipid A
SAMEA390648700543 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
SAI67012
UniProt:
A0A157S9A9
LinkDB
All DBs
Position
1:complement(577647..578570)
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AA seq
307 aa
AA seq
DB search
MFRQRTIQNLVRTTGVGVHSGRRVELTLRPAQPNTGIVFHRIDLPQVVDLPAQANAVGDT
RMASVLQQGNVRVSTVEHLMSALAGLGIDNLHVDLTAEEVPIMDGSAATFVYLLRSAGIA
EQNAPKQFIRVLKPVEVREGEGRNEKWARLEPHEGFALAFSIDFRHPAIDATANFAEIDF
ATHSYVREIARARTFGFVNEVEALRSMGLARGGSLDNAIVMDEYRVLNSDGLRYDDEFVK
HKILDAIGDLYLLGKPLVARYVAQKSGHALNNQLARALLEQQDAWELVSYESQAAAPQAF
RHEWKLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgacagcgcaccattcagaatctcgtccgtacgactggcgtcggagtccactcc
gggcgtcgggttgagctgacgctgcgtcccgcacagcccaatacgggtatcgtttttcac
cgcatcgacctgcctcaagtggtcgatctgcccgctcaggcgaatgcggtaggcgatacg
cgcatggcttcggtgctgcagcagggcaacgtgcgcgtgtccacggttgagcacctgatg
tcggcgctggccggtctgggcatcgacaatctgcacgtcgacctgaccgccgaagaagtg
cccatcatggatggcagcgcggccaccttcgtctatctgttgcgttcggccggcattgcc
gagcagaacgcgcccaagcagttcattcgtgtcctcaagcccgtggaagtccgcgaggga
gagggccgcaacgagaagtgggcccgcctggaaccccatgagggtttcgcgctcgctttc
tcgatcgacttccgtcatccggccatcgatgcgacggcgaatttcgccgagatcgatttc
gccacccattcctatgtgcgcgaaatcgcgcgtgcgcgcaccttcggtttcgtcaacgag
gtcgaggccctgcgctcgatggggctggcccgtgggggcagcctggacaatgccatcgtg
atggacgaataccgcgtcctcaacagcgatgggctgcgctacgacgatgagttcgtcaaa
cacaagatcctggacgccatcggcgacctgtatctgctgggcaagcccctggtggcgcgc
tatgtggcgcagaaatccgggcacgctctcaacaaccagctcgcccgtgccctgctggag
cagcaggatgcctgggaactggtgtcctatgagtcgcaggcagccgcgccccaggcattc
cgccacgagtggaagctggcctga
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