Borrelia turcica: DB313_02885
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Entry
DB313_02885 CDS
T05670
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
btur
Borrelia turcica
Pathway
btur03030
DNA replication
btur03410
Base excision repair
btur03420
Nucleotide excision repair
btur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DB313_02885 (ligA)
03410 Base excision repair
DB313_02885 (ligA)
03420 Nucleotide excision repair
DB313_02885 (ligA)
03430 Mismatch repair
DB313_02885 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btur03032
]
DB313_02885 (ligA)
03400 DNA repair and recombination proteins [BR:
btur03400
]
DB313_02885 (ligA)
Enzymes [BR:
btur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DB313_02885 (ligA)
DNA replication proteins [BR:
btur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DB313_02885 (ligA)
DNA repair and recombination proteins [BR:
btur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DB313_02885 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DB313_02885 (ligA)
MMR (mismatch excision repair)
DNA ligase
DB313_02885 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DB313_02885 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
HHH_5
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AYE36752
UniProt:
A0A386PN82
LinkDB
All DBs
Position
586135..588150
Genome browser
AA seq
671 aa
AA seq
DB search
MNKKIEDEILYLKNLIKKWNKEYYIDSSPSVDDLHYDKSLLRLQDLENKYPEYKTLDSPT
LKFGSDLLNDFKEIEHSFPILSLDKAYDEQELLLWIYKVGLGDSSSSLGVLNGISVEPKI
DGCSIVLYYKDGILERALTRGDGRVGNDVTENVRTIKNVPLCIDKRVDLVLRGEIYIGKE
NFFKINQTLENSYINARNLASGILRRINSREVANFPLDIFVYDVLYSSLGFNTNHDTLDE
LEKLGFKVNPFFKLFDDKNLEEDIIGYVREIENKRNTLEYEIDGVVLKVDSFSLREALGH
TSHHPKWSIAYKFESLTSVSKVIDIFVQVGRSGKITPVAHIERVLVSGAFIENATLHNQD
YIDSIDLNIGDIVSISRRGDVIPAVESVIEKLSVGSFKIPGSCPSCGISLIREGAHLFCE
NKSCPFRIIEQIKYFCSKKCMDIVGLSNKTIEFLFKMNFIYSEIDLYTFNFDKLINVKGF
KLKKIDKFKNSIENSKNRPFRKLFLSMSIREVGENTIELLIANNLNSFDVISTLCKDKEN
ALVELLKIKGIGERIALNIIESFNDENILSKFNFFKELGFKMEEDNTNYDLNTASLLGKK
FCITGSFEGYSRHILIEKINKKGAIFNNSVTKNLDFLLVGERPGLKVRKAMDLGIKIISF
SDIRSLIELND
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaaatagaagatgaaattttatatttaaaaaatttaatcaagaaatggaat
aaagagtattatatcgattcttcaccaagtgtagatgacttacattatgataaatctctt
ttgcgactgcaagatttggagaataagtatcctgaatataagactttagattctcccact
cttaaatttgggagtgatcttttaaatgattttaaagaaattgaacattcttttcctata
ttgagtttagataaggcttatgatgaacaggaattgttgttgtggatttataaagtagga
ttaggggactctagttctagtttgggagttttaaatggtatttcggttgagccaaaaatt
gacgggtgttcaattgttctttattataaggatggcatacttgagagagcgctaactaga
ggggatggaagggttggtaatgatgttactgagaatgttagaacaatcaaaaatgttcct
ttatgtattgataaaagggttgatttagtattacggggtgagatttatataggtaaggaa
aatttttttaaaataaatcaaacattagaaaactcttatattaatgctaggaatttagct
tcaggtatacttagaagaataaatagtcgggaagttgctaattttcctttagatattttt
gtttatgatgttttgtattctagtttaggttttaacacaaatcatgatactttggatgaa
cttgaaaagttaggatttaaagttaatcctttttttaagctttttgatgataaaaattta
gaagaagatattattggttatgttagagaaatagagaataaaagaaatactcttgaatat
gaaattgatggggttgttcttaaagttgatagttttagtttaagagaagctttaggacat
acttctcatcatccgaagtggtctatagcttataaatttgaatctcttacgagtgttagc
aaggtgattgatatctttgttcaggttgggcgtagtggtaaaattactcctgttgcgcat
attgaaagagttcttgtttctggagcttttattgaaaatgcaactttgcataatcaagat
tatatagattctattgatttaaatattggagatattgtttcaatttcaaggcgtggagat
gtaattccggctgttgagtcagttattgaaaagctttcagttggtagttttaaaattcca
ggtagttgtccttcatgtggaatctctttaataagggagggtgctcaccttttttgtgaa
aataaaagttgtccttttaggataattgagcagataaagtatttttgtagtaagaaatgt
atggatattgtaggactttcaaataaaacaattgagtttctttttaaaatgaattttata
tattcagaaattgatctttatacttttaattttgataagcttattaacgtgaaggggttt
aagttaaagaaaatagataaatttaaaaattcaatcgaaaacagcaaaaacaggccattc
agaaagctatttcttagtatgagcattagagaagtaggggagaatacaatagaattgcta
attgctaataatttaaattcatttgatgtgattagtactctttgtaaagataaagagaat
gcccttgtagagcttttaaagattaagggtataggggaaagaatagctttaaatattatt
gaatcgtttaatgatgagaatattttgagcaaattcaacttttttaaagaattaggattt
aagatggaagaggacaatacaaattatgatttaaatactgcgtctttacttgggaaaaag
ttttgtattacaggttcttttgaaggatattcaagacatattcttattgaaaaaataaat
aagaaaggtgccatttttaacaattcagttactaagaatttagattttttacttgttgga
gagaggcctggcttgaaagtgagaaaagctatggatttgggtattaaaataattagtttt
tctgatattagaagtttaatagaattaaatgattag
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