Buttiauxella sp. 3AFRM03: D8682_15270 Help Entry D8682_15270       CDS       T05676                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism buf  Buttiauxella sp. 3AFRM03 Pathway buf03030   DNA replication buf03410   Base excision repair buf03420   Nucleotide excision repair buf03430   Mismatch repair Brite KEGG Orthology (KO) [BR:buf00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     D8682_15270 (ligB)    03410 Base excision repair     D8682_15270 (ligB)    03420 Nucleotide excision repair     D8682_15270 (ligB)    03430 Mismatch repair     D8682_15270 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:buf03032]     D8682_15270 (ligB)    03400 DNA repair and recombination proteins [BR:buf03400]     D8682_15270 (ligB) Enzymes [BR:buf01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      D8682_15270 (ligB) DNA replication proteins [BR:buf03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      D8682_15270 (ligB) DNA repair and recombination proteins [BR:buf03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      D8682_15270 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      D8682_15270 (ligB)    MMR (mismatch excision repair)     DNA ligase      D8682_15270 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       D8682_15270 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden DUF3701 HHH_8 RNA_ligase Motif Other DBs NCBI-ProteinID:  AYN28214 UniProt:  A0A3G2IFH3 LinkDB All DBs Position complement(2949488..2951179) Genome browser AA seq 563 aa AA seqDB search MKWITKFIGFLGLMSAMASATCPAWSSGQVQQEMSGLNEKLSQWDQSYYQQGVSEVSDAT YDGLRRQYNEWQRCFHPSEKPQPPQLATQGKALHPVAHTGLKKLPDSAAVAQWAKGKTDL WVQPKVDGVAVTLVYQQGRLAKLLSRGDGEKGQDWTEKAKMIPAIPVTLSGPLANSVLQG EVFWKRDNHIQKTMGGINARGKVAGAMMSQSDSALLNELGIFIWAWPDGPADMNLKLDTL AQAGFPLTKIWSTPVSSVETIAMLRESLFTTPLPFVTDGIVVREAIEPAGQYWLPGKATW VMAWKFPPAQQIAEVKGIQFTVGRTGKVTVVLRLNPLQIDDKQVKRVNIGSVKRWQALDI ALGDQVMVSLAGQGIPRVDEVVWRVSQRNKPPLPTDKMVTPLSCLFFEVWCREQFIARLA WISSPEVLNINGVSVCTWQQIQQNLNLRHIFSWVTVSQEELLKISGISSARAAHLWQQFS QVRQQPFKQWLIAFGLPLPRAVFTTLPDSQWSQLVARDELSWQKLPGIGAGRAKKLVEFV NHPQIAALVVFLAEQGILGFTGQ NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt atgaagtggataacaaaatttatcggttttctgggactgatgagcgcaatggcgtcggcg acatgtccggcttggtcatcggggcaagtccagcaggagatgtctggattgaatgaaaag cttagtcagtgggatcaatcttattaccaacagggcgttagtgaggtcagtgatgcgaca tacgatggtctacgcaggcaatacaatgaatggcagcgctgctttcatccctcggaaaaa ccacaaccaccgcagctggcaacacaggggaaagcgttgcacccggttgctcatactggc ttaaaaaaactgccagatagtgcagcagttgctcaatgggccaaaggcaaaaccgatctc tgggtgcaacctaaagtcgatggtgtggcggtgaccctggtttatcagcaaggacgcctg gctaaactccttagccgcggggacggagagaaagggcaagactggacagagaaggccaaa atgattcccgctatccccgtaaccctttcaggcccgcttgctaatagcgtgttacaaggg gaggttttctggaaaagagataatcacatacagaaaacgatgggtggcataaatgccaga ggaaaagtggctggtgccatgatgagccaaagcgactcagccttgctcaatgaattgggg atatttatttgggcgtggccagatgggcctgctgatatgaatctgaaattagacacgctc gcacaggctggttttccgctaaccaaaatttggtcaacgcctgttagctcagtggaaaca atcgcgatgttacgggagtccttgtttacgacccctcttccctttgtgaccgacggtatt gtggttcgtgaggcaatagagcctgcggggcaatattggttgccaggcaaagcaacgtgg gtgatggcatggaaatttccaccagcccagcaaattgcagaggtaaagggcattcaattt acggtcgggcgcacaggaaaagttactgttgttctaagactcaatcccctgcagatagat gataaacaggtcaaacgagtgaacatcggttcagtcaaacgttggcaagctctggatatt gctttgggtgatcaggtgatggtgagtcttgcagggcaggggattccgcgcgtcgatgaa gtggtatggcgggtaagccagcgcaataaaccgccgctgccaacagataaaatggttact ccattgagctgtctgttttttgaagtttggtgtcgcgagcagtttattgcgcggttggcc tggattagctctccagaagtattgaacatcaatggagtgagcgtatgcacctggcagcag atccaacagaatcttaatctaaggcatatattttcttgggtaaccgtcagtcaggaagaa ctgttgaaaattagcgggatttcttcagccagagcggcccatctttggcagcaattctcg caagtcaggcaacagccctttaagcagtggttaatcgcttttggtttaccgctcccccga gctgtgtttaccactctgcccgattctcaatggtcgcagttagttgcgcgagatgagctt agttggcaaaaactgccgggcattggtgctggccgggctaaaaagttggtggagtttgtc aatcatccccaaattgctgcattagtggtttttcttgcagagcagggaatcctgggattt accggtcagtga

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