Burkholderia sp. CCGE1001: BC1001_5303
Help
Entry
BC1001_5303 CDS
T01424
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18903
outer membrane protein, multidrug efflux system
Organism
bug
Burkholderia sp. CCGE1001
Module
bug_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bug02000
]
BC1001_5303
01504 Antimicrobial resistance genes [BR:
bug01504
]
BC1001_5303
Transporters [BR:
bug02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1001_5303
Antimicrobial resistance genes [BR:
bug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
BC1001_5303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7061
Motif
Other DBs
NCBI-ProteinID:
ADX58684
LinkDB
All DBs
Position
2:1922667..1924223
Genome browser
AA seq
518 aa
AA seq
DB search
MKQPCAGRVVMTCLAAASAGMLAACTVGPDYKRPQAEVPTAWNTDSYWRVAAPSHAPMDP
DWWNVYHDATLAALETQALAQNQTLVAASAHYAQAKATLANTRAQQMPEVDLAASASRFR
ISQDRPRTNYATPTVSTVQNNLQLGPAVSYDTDLFGRIRRQVEGAMASAEQSADDLANAR
LILTTEVASDYFSLRELDTEIDVLNQSVKLQQKALDYVNAEHELGAVSGLDVAQQKSLLD
TTRVQAQLLLNQRAQYEHAIAALVGVSAPQFAIEPKVLTFQVPAIALGVPSDLLQRRPDI
ASAERAMAAANAQIGVAKAAFFPSLTLTPGIGWEATQFSSLLSAPTLMWTLGAAAGQVLF
DGGRRAANVQYASEGYKATEANYRQTVLNAFQQVQDGITGLAVLDGAVKQSEEAVADAQR
LLGLANDRYSGGLVAYLNVITAQQSLLNSRRQDAQIRGQQMTLSVALVKALGGGWDEGAA
AAAAGPGGSQQNTQPTAQQNTQPHSQADGAIQTRAAAQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagccatgcgccggccgcgtcgtgatgacgtgtttagccgcggcgagcgcgggc
atgctcgccgcctgcaccgtggggcccgactataaacggccgcaggccgaggtgccgacg
gcatggaacaccgactcctactggcgcgttgccgctccctcgcatgcgccgatggacccg
gactggtggaacgtctatcacgacgccacgctcgccgcactggaaacgcaggcgctcgcg
caaaaccagacgctcgtcgcggccagcgcgcactatgcgcaggcgaaggcgacgctcgcg
aacacgcgcgcgcagcaaatgcccgaagtggacctcgcggcatcggcgtcgcgctttcgt
atttcgcaggacaggccgcgcaccaactacgccacgccgaccgtctcgaccgtgcagaac
aatctgcaactcggtcccgccgtcagctacgacacggacctgttcggccgcatacgccgt
caggtggagggcgcgatggcttccgcggaacagtcggccgacgatctcgccaacgcgcgg
ctcattctcacgaccgaggtcgcaagcgattacttctctctgcgcgaactcgataccgaa
atcgacgtgctcaatcaatcggtcaagctgcagcaaaaagcgctggactacgtgaacgcc
gaacacgaactcggcgcggtatcgggcctcgacgtcgcgcagcaaaagtcgctgctcgac
acgacgcgtgtgcaggcgcaactgttgttgaaccagcgcgcgcaatacgagcatgcgatt
gccgcactcgtcggcgtgagcgcgccgcagttcgcgatcgaaccgaaggtgttgacgttt
caggtgccggccattgcgctcggcgtgccgagcgatctgctgcagcggcggcccgatatc
gcctcggccgagcgcgcgatggcggcggccaatgcgcagatcggcgtcgcgaaggcggcg
tttttcccgagcctcacgctcacgccgggcatcggctgggaagccacgcagttctcgagc
ttgctgagcgcgccgacgctcatgtggacgctcggcgcggcggcgggccaggtgctgttc
gacggcgggcgccgcgcggccaatgtgcaatacgcgagcgaaggctacaaggcgacggag
gccaattatcggcaaaccgtgttgaacgcattccagcaggtgcaggacggcatcacggga
cttgcggtgctcgacggcgctgtgaagcagtcggaagaagcggtcgcggacgcgcagcgc
ctgctcgggctcgccaacgaccgctattccggcggtcttgtcgcgtatctgaacgtgatc
accgcgcagcagtcgctgcttaacagcaggcgtcaggacgcgcagattcgcggtcagcag
atgacgctttccgtcgcgctcgtgaaggcgttgggcggcggctgggacgagggcgcggca
gccgccgctgccggaccgggcgggtcgcagcagaacacgcaaccgaccgcgcaacagaac
acgcaaccgcactcgcaggcagacggcgcgattcaaacgcgcgctgccgcgcagtaa
DBGET
integrated database retrieval system
