Buchnera aphidicola Ua (Uroleucon ambrosiae): BUAMB_063
Help
Entry
BUAMB_063 CDS
T01830
Symbol
lig
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
buh
Buchnera aphidicola Ua (Uroleucon ambrosiae)
Pathway
buh03030
DNA replication
buh03410
Base excision repair
buh03420
Nucleotide excision repair
buh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
buh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BUAMB_063 (lig)
03410 Base excision repair
BUAMB_063 (lig)
03420 Nucleotide excision repair
BUAMB_063 (lig)
03430 Mismatch repair
BUAMB_063 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buh03032
]
BUAMB_063 (lig)
03400 DNA repair and recombination proteins [BR:
buh03400
]
BUAMB_063 (lig)
Enzymes [BR:
buh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BUAMB_063 (lig)
DNA replication proteins [BR:
buh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BUAMB_063 (lig)
DNA repair and recombination proteins [BR:
buh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BUAMB_063 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUAMB_063 (lig)
MMR (mismatch excision repair)
DNA ligase
BUAMB_063 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BUAMB_063 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
Nlig-Ia
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
DUF3797
BRCT_2
Ribosomal_L33
DUF4606
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
AEO07893
UniProt:
G2LNV6
LinkDB
All DBs
Position
69731..71767
Genome browser
AA seq
678 aa
AA seq
DB search
MTSLKKKINKLKKNILQYEYFYHTLDQPIISDAEYDYLLEKLYNLELENKELITLDSPTQ
KVGANLLSRFKKNQHFSPMLSLENTFDINGYLNFKKKIKKSIGINKKIIFCCELKIDGIA
ISIIYERGILVRAVTRGDGLKGENVTHNVRMIQSIPLKLTGSDIPERLEVRGEIFMLKSD
FIKLNKEYKKNSNKCFSNPRNAAAGSLRHIDSKIIFERKLMFTCYMCIFFPDLTQTLTTH
YERLMKCEYWGLPVNPDIIVCINNNDIFDFYKKFEEKRRILDFDIDGIVIKVNSIELQKK
LGCNTKFPRWAIALKFVSAEKITLLKDVKFQVGRTGAITPVAYFDAVCISGVIIRKASLH
NKNEIERLNLHINDSIIICRSGDVIPKILSVVEALRSNHEKKIVFPKYCPVCQNKLLENS
EDKIIRCHAGWVCAVQKEKALEHFFSKKALNAVGLGPKIIHELIQKKYVNNPIDFFYLTE
INLMQLNNFGRKKSLKILASIHSCKKTTFKRFIFSLGISNVGEVIAEKLANHFVNLEALM
YSDILKISLISGIGKTIAHNIYNYFSIVSNCKMVNKLINEVGIFWNHQEIDSIENKNLFL
LDKKIVLTGVFKNISRTELKKLLIQLGAKVLNHISKNIDFLICGKKFGSKLYQAKKFKIL
IIYEEDLYNFINFNHKKI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttaaaaaaaaaaattaataaattaaaaaaaaatattttacaatatgaatat
ttttatcatactttagatcaaccaattatttctgatgcagaatatgattatttattagaa
aaattatataatttagaattagaaaacaaagaattaattactttagattcacctacacaa
aaagttggcgctaatttattatccagatttaaaaaaaaccaacatttctctcctatgtta
tctttagaaaatacatttgatataaatggatatttaaattttaagaaaaaaattaaaaaa
tctattggcattaataaaaaaattattttttgttgtgaacttaaaatagatggtatagct
attagtataatttatgaaagaggaatattagtacgagctgtaactcgaggcgatggttta
aaaggtgaaaatgttactcataacgttcgaatgattcaatcaatacctttaaaattaact
ggttctgatatacctgaacgattagaagttcgaggtgaaatatttatgttaaaatctgat
tttataaaattaaataaagaatataaaaaaaattcaaataaatgtttttctaatcctcga
aatgcagcagccggttcattacgtcatattgattcaaaaataatatttgaaagaaaatta
atgtttacatgttacatgtgtattttttttccagatctaactcaaacattgactactcat
tatgaaagacttatgaagtgtgaatattggggtttaccagttaatccagatattatagtt
tgtataaataataatgatatttttgatttttataagaaatttgaagaaaaaagacgtatt
ctcgattttgatatagatggtattgttattaaagtaaattcgatagaattacaaaaaaaa
ttaggatgtaatacaaagttcccaagatgggctatagcattgaagtttgtatctgcagaa
aaaattacattattaaaagatgttaaatttcaagttggaagaacaggtgcaattacgccc
gtcgcttattttgatgctgtatgtatatctggtgttataataagaaaagcgtcattacat
aataaaaatgaaatagaaagattaaatttacacataaatgattctattataatttgtcga
tcaggtgatgttatacccaaaatattaagtgttgtagaagctttacgttcgaatcatgag
aaaaaaattgtttttcctaaatattgtccagtatgtcaaaataaattattagaaaattca
gaagataaaataattcgttgtcatgctggctgggtatgtgcagttcaaaaagaaaaagcc
ttagaacattttttttctaaaaaagctttaaatgctgttggattaggtccaaaaattatt
catgaactaattcaaaaaaaatatgttaataatcctatagattttttttatctcacagaa
ataaatttaatgcaattaaataattttggacgtaaaaaaagtctaaaaatacttgcttca
attcattcatgtaaaaaaactacgtttaaacgttttattttttctttaggtatatcaaat
gtaggtgaagttattgctgaaaaacttgccaatcattttgtgaatttagaagcattaatg
tattctgatattttaaaaattagtttaatatctggaataggaaagactattgcgcataat
atatataattatttttctatagtttctaattgtaagatggttaataagttaataaatgaa
gtaggtattttttggaatcatcaagaaattgattcaatagaaaataaaaatttattttta
cttgataaaaaaattgttttaactggtgtattcaaaaatatttccagaacagaattaaag
aaactattaattcagttaggagctaaagttttaaatcatatctctaaaaatattgatttt
ttaatttgtgggaaaaaatttggttctaaattatatcaggctaaaaaatttaaaatttta
attatttatgaagaagatttgtacaattttattaattttaatcataaaaaaatataa
DBGET
integrated database retrieval system
