Burkholderia sp. PAMC 26561: AXG89_03540
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Entry
AXG89_03540 CDS
T05481
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum00300
Lysine biosynthesis
bum00550
Peptidoglycan biosynthesis
bum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXG89_03540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXG89_03540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bum01011
]
AXG89_03540
Enzymes [BR:
bum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AXG89_03540
Peptidoglycan biosynthesis and degradation proteins [BR:
bum01011
]
Precursor biosynthesis
Amino acid ligase
AXG89_03540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
NlpE_C
Motif
Other DBs
NCBI-ProteinID:
AME23044
LinkDB
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Position
1:complement(770868..772415)
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AA seq
515 aa
AA seq
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MSDLIKQQAQIAKAVAWLRSHADAGAQLHADSRSLKPGDVFFAYAVDGADSRPHIDAAFK
QGAAAVLYQPENFPGKPDASRSFAVKALNELAGPIASAWYGEPTESMLVVGVTGTNGKTS
CSQWLATALSALGTPTAVIGTLGSGMPGKLVHSGFTTPDAPQLQRTFAQFKTEGAKGVAM
EVSSHALHQGRANGTKFDIAIFTNLTQDHLDYHGTFAAYEGAKAKLFAWPALKAAVINRD
DAAGQRLIAACHGRTRTIAYGIEGIEGASDVTNVKADASLAASAVRATATGTAFHLESDW
GAADVEVATLGEFNVSNLLGVLGALLAAHVPLDAALAQIAKLEPVNGRMQRLGGRLQNDE
PLVVIDYAHTPDALEKTLLALRPIAETRGGQLICMFGCGGDRDATKRPLMGAIAEKNSDH
VVITSDNPRSEDPLAIIGQIAAGFQDAAKARRIEDRASAILQAIRTAAREDVVVLAGKGH
EATQEIMGKKRAFSDQDHARLALAARATKARGGGE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttgatcaagcaacaggcgcagatcgcgaaagcggtggcgtggttgcgctcg
catgccgatgccggtgcgcaactgcatgccgattcgcgttcgctcaaaccgggcgatgtg
ttttttgcctacgccgttgacggtgccgacagccgtccgcatatcgatgccgctttcaag
caaggcgcggccgccgtgttgtatcagccggaaaacttcccgggcaagccggatgcgtcg
cgttcgtttgccgtgaaggcgttgaacgaactggccgggccgatagcatcggcgtggtat
ggcgagccgaccgaatccatgctggtcgtgggtgtgactggaacgaacggcaagacgtcg
tgcagccagtggcttgcaacggcgctctccgcgctgggtacgccgaccgccgtgatcggc
acgcttggcagcggcatgccgggcaagctcgtgcattcaggtttcacgacgcccgacgcg
ccgcaactgcaacgcacgtttgcgcagttcaagacggaaggcgcgaaaggcgtcgccatg
gaagtgtcgtcgcatgcgttgcatcaggggcgtgcgaacggcacgaagttcgacatcgcg
atcttcacgaatctcacgcaggatcacctcgactatcacggcacattcgccgcgtatgaa
ggtgccaaggcgaagctgtttgcgtggcctgcgttgaaggctgccgtcatcaatcgtgac
gatgccgccggtcaacgcctgatcgctgcctgtcacggccgcacgcgaacgattgcttat
ggcatcgaaggcatcgagggcgcgtcggacgtgacgaatgtaaaagccgatgcatcgctg
gccgcgagcgccgtgcgtgcaaccgcaacgggcacggcgtttcacctggagtccgactgg
ggcgccgctgacgtggaagttgcaacgctcggcgagttcaacgtgagcaatctgctcggc
gtgctcggcgcgttgctggccgcgcacgttccgctcgacgccgcgctcgctcagatcgcg
aagctcgaaccggtgaacggccgcatgcagcgtctcggcggccggttgcagaacgacgaa
ccgctcgtggtgatcgactatgcgcatacgccggatgcgctggagaaaacgctcttggcg
ctgcggccgattgcagaaacgcgcggcggtcagttgatctgcatgttcggctgcggcggc
gatcgcgatgcaaccaagcgtccgctgatgggcgccatcgcggaaaagaattcggatcac
gtggtgatcacgagcgataacccgcgcagcgaagatccgcttgcgatcatcggtcaaatc
gcggcaggctttcaggatgcggccaaagcgcgtcgcatcgaagaccgcgcgagcgcgatt
cttcaggcgatccgcacggcggctcgcgaggacgtggtcgtgctggccggaaaaggccac
gaagccacgcaggaaatcatgggcaagaagcgcgcgttttccgatcaggatcatgcgcgc
ctggctctcgccgctcgcgccacgaaagcgcgcggaggtggtgaatga
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