Burkholderia sp. MS389: GJG85_12405
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Entry
GJG85_12405 CDS
T10544
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
burm Burkholderia sp. MS389
Pathway
burm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJG85_12405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burm03400
]
GJG85_12405 (nth)
Enzymes [BR:
burm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GJG85_12405 (nth)
DNA repair and recombination proteins [BR:
burm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJG85_12405 (nth)
Prokaryotic type
GJG85_12405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_8
DUF4817
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QRR14162
UniProt:
A0AAQ0CQW5
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All DBs
Position
1:2665810..2666454
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AA seq
214 aa
AA seq
DB search
MNANKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT
PRQIVALGEEGVTEYIKTIGLYRTKAKNVVATCRILLERYDGEVPADREALEGLPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVETALEKFTPKEFLQDAHHWLI
LHGRYVCKARRPECWHCAIEPLCEFRPKTPPPNE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaacaaacgacgcgcgatctacgaaacgctgcagagcctcaatccgcatccg
accaccgagctcgaatactcgacgccgttcgagctgctgattgccgtaatgctgtccgcg
caggcgaccgacgtgtcggtcaacaaagcgatgcggaaaatgttcccggtcgcgaacacc
ccgcgacaaatcgtcgcgctcggcgaggaaggcgtcaccgagtacatcaagacgatcggc
ctctatcgcaccaaggcgaagaacgtggtcgcgacgtgccggatcctgctcgagcgctac
gacggcgaagtgccggccgatcgcgaagcgctcgaaggcttgccgggcgtcggccgcaag
accgcgaacgtcgtgctgaacaccgcgttcggccagccgacgatcgcggtcgacacgcat
atcttccgcgtcgcgaatcgcaccgggctcgcgccgggcaaggacgtgcgggccgtcgag
accgcgctcgagaagttcacgccgaaggaattcctgcaggacgcgcatcactggctgatc
ctgcacgggcgctacgtctgcaaggcccgccggcccgaatgctggcactgcgcgatcgag
ccgctgtgcgagttccggccgaagacgccgccgcccaacgagtga
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