Butyricimonas faecalis: D8S85_07395
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Entry
D8S85_07395 CDS
T05785
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
buy
Butyricimonas faecalis
Pathway
buy03030
DNA replication
buy03410
Base excision repair
buy03420
Nucleotide excision repair
buy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
buy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D8S85_07395 (ligA)
03410 Base excision repair
D8S85_07395 (ligA)
03420 Nucleotide excision repair
D8S85_07395 (ligA)
03430 Mismatch repair
D8S85_07395 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buy03032
]
D8S85_07395 (ligA)
03400 DNA repair and recombination proteins [BR:
buy03400
]
D8S85_07395 (ligA)
Enzymes [BR:
buy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
D8S85_07395 (ligA)
DNA replication proteins [BR:
buy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D8S85_07395 (ligA)
DNA repair and recombination proteins [BR:
buy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
D8S85_07395 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D8S85_07395 (ligA)
MMR (mismatch excision repair)
DNA ligase
D8S85_07395 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D8S85_07395 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
HHH_2
DNA_ligase_OB
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
OAS1_C
NuiA
Auto_anti-p27
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
AZS29404
UniProt:
A0A3S9VS82
LinkDB
All DBs
Position
complement(1628327..1630831)
Genome browser
AA seq
834 aa
AA seq
DB search
MDRIVELRKLLEYYNYLYYVKNEPVVTDQKFDELMHELERLEAEHPEMFDPNSPTQRVGN
DTTNEFVQVAHKYGMMSLANTYSEQEIRDFDERVRKGIGGDDVEYVCELKYDGTSISLRY
EEGNLQVAVTRGDGVRGDDVTTNVRTIRTVPLHMQGEDYPAEFEIRGEILMPFAVFNRLN
EERLEAGEALFANPRNAAAGTLKLQNSSVVAKRQLDCYLYYVPGEITLTPTHYGNLMKAR
EWGFNVPPYIELCHNIDEILDFIHKWDVERKNLPVPIDGIVIKVNSIRQQLQLGYTAKSP
RWAVAYKFKAERVETRLLSVDYQVGRTGSITPVANLEPVHIAGTTVKRASLHNEDIIREL
DLHQHDMVYVEKGGEIIPKIVGVDVEKRVADAPEIEFITRCPECGTALIRHEGEANHYCP
NEDHCPPQIAGKLEHFVSRKAMDIEGMGGETIDLLLTKGFIRDIADIYTLPSRREELIGL
EKILYPESYVMTSIPLGKVIYAFEIGMKNISAKNADVLAEHFGSLAKLAGASKEELMAVG
SLQFPGDREKSVNKILEYFRMPFNEPLERLKQAGEVDMLPLDVVIYALDIPGIDFHKAGL
LSVKFDYIYRLYTATLEEIAETDEMSREDAERVYRFLQGKEKLIRKMNTLSVYRLQERSV
DNLIAGIEKSKQRNLPEFINALGIRYIGETASRNLARHFKEVRKLMDATFEQLTEVEDIG
EQMAGSVIRYFEKTENREMMERFLQYGISGTMQEEEGESDRLAGTTFVITGTLSLPREHF
KAMILKAGGKVSDSVSSKTTYLLAGENAGSKWQKAQKLNVTILTEEEFNTLMGS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggatagaattgttgagttgagaaagttgttggagtattacaactacttgtactatgtg
aagaatgagccggtggttaccgatcagaagtttgacgagttgatgcacgagctggaaagg
ttggaagcggagcatccggagatgtttgatccgaattcaccgacacagcgggtggggaat
gacacgacgaatgagttcgtgcaggtggcgcataagtatggcatgatgtccttggcgaac
acgtatagcgaacaggagatccgggattttgacgagcgggtgcggaaaggtatcggcggg
gatgacgtggagtatgtctgcgagttgaagtatgacgggacttctatcagcctgcgctac
gaggagggtaatttgcaggtggcggtgacacggggtgatggcgtgaggggggatgacgtg
acaacgaatgtacggactattcgaacggtgccgttgcatatgcagggggaggattatccc
gcggagttcgagattcggggggagattctgatgccttttgccgtgtttaatcgattgaat
gaggagcggctggaggcgggagaggctttgtttgccaacccgcggaatgcggcggcgggt
acgttgaagttgcagaattcgtccgttgttgccaaacggcagttggattgttatttgtat
tacgtgcccggagaaatcacgttgaccccgacgcattacgggaatttgatgaaagcgagg
gagtggggttttaatgttcccccgtatatcgagttgtgtcacaatattgatgagattcta
gattttattcacaagtgggatgtggaacggaagaatcttccggtaccgattgacgggatc
gtgatcaaggtgaatagtatcaggcaacaattgcaattgggatacacggcgaaatcgccg
cgttgggctgtggcttataagtttaaggcggaacgggtggaaacgcgattgcttagcgtg
gattaccaggtgggacgtaccggttcgattactccggtggcgaatctggaaccggttcat
atcgcgggtactaccgtgaagcgggcttcgctgcataacgaggatattattcgagagttg
gatttgcatcagcatgatatggtgtacgtggagaaagggggagagattatcccgaagatc
gttggggtagacgtggaaaagagggtggcggatgccccggagatcgagtttatcacgcgt
tgtccggagtgtggcaccgcgttgattcgccatgagggagaggcaaatcattattgtccg
aatgaggatcattgtcccccgcagattgccgggaaactggaacatttcgtgagccggaag
gcgatggatatagagggtatgggaggggagaccattgatttgttgttgacgaaagggttt
atccgggatatcgcggatatttatacactgccctctcggagagaggagttgatcgggttg
gaaaagattctttacccggagagttacgtgatgaccagtattccgttggggaaggtgatt
tacgcttttgagatcgggatgaagaatatatctgccaaaaacgcggatgttttggcagag
cattttggtagtttggcgaaattggccggggcttcaaaagaggagttgatggctgttgga
agcttgcaattccccggtgaccgggagaaaagtgtcaataaaatattggagtatttccgg
atgccgttcaacgagccgctggagcgtttgaagcaggccggggaggtggatatgctgccg
ttggatgtggtgatttacgcgctggatatacccggaattgatttccataaggcggggttg
ttgtcggttaagtttgactacatttaccgtctgtacacggcaacgctggaggagatcgcg
gagactgacgaaatgtcacgtgaggatgccgagcgggtgtatcgttttttgcaggggaag
gaaaagttgatccggaagatgaacaccttgagcgtgtatcgtttacaggaaagatcggtg
gataatttgattgccgggatcgagaaatcaaagcagaggaatctgccggaattcattaat
gcactggggattcgctatatcggagagacggcttcgagaaatttggcccgtcattttaag
gaggtccggaagttgatggacgcgacatttgagcagctgacggaggtggaagatatcggg
gagcagatggcgggtagcgtgatccgttattttgaaaaaacggagaaccgggagatgatg
gaacgctttttgcaatatggtattagcggaacaatgcaggaagaggagggagaatccgat
cggttggccggaactaccttcgtgatcacgggaactctttcgttaccgcgggaacatttt
aaggctatgatcttgaaggccgggggaaaagtcagtgattccgtgtctagcaagacgact
tatctgctggcgggagagaatgccgggagtaaatggcaaaaagcacagaagttaaatgta
actattttgaccgaagaagagtttaacacgttaatgggttcatga
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