Bombus vancouverensis nearcticus: 117156918
Help
Entry
117156918 CDS
T07628
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117156918
Membrane trafficking [BR:
bvan04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117156918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
FerI
Ferlin_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
117156918
NCBI-ProteinID:
XP_033190325
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MSPRKTRSNVYQICIKILKAKHLPQNANPMVVVKVGNRRKKTVVRERTDSPIYNEYFVFD
LFCNLNELLSTKITIAVYLKGYLRLKFHGSTTFEVALVWDQPDHQYYHKWAMLTNPKDVS
AGPKGYVKCNIAINVKGEKLKVHPDTEGEDDIEGNLLLPVGGEFLPYRQRACYIFTIYRA
DGLPDMSSLCVKNDFENINPFVQISFAGMKETTSEAWQTYRPRFNEKITFREMFPSLCQR
VRIAIKHRVNSCRTCVVASYILNMSKISNSGEYGFLPTFGPSFLHFYGSGTTERNSCFGK
CSIALPFYRGRVLLSLKTEMDDSETTTAGISAERELVAPIIERSLWKTEEYYLVTVLYDI
SMIDRGKFWSKSISFEVSLGNAGNRQFARSQCFEDNNDGSLRMIEIWDPPLELPXRNYVS
TLQLLVNTNDKLRYVRLPYVKYDQFSTGNQMPDRKPEFESETLPRLTGTLDGKYNYVPLG
SRKPCLYVRSWWPNLDWRMHNSNNLAFIADFLEQKLEQLEDMVELQHPDTYKFYNETIRT
MKSHCIHYLHTLDTGRYDDEGGTTKLDRHRVNLCHKEIENILKRIKINGELPSNHYTRIA
MAHAYQYLAKVKKLREDHGLPDVFIWMIAGSKRVAYARFPAERIIYSEEMTERGSLCGQR
VDVFLVHPRDEEGADYMACKLELFLWLGNAEYIGACWASIPPGYKVDHERNIDSFPKYLE
YTRSTTFQLRAHIFQGRFDPGMDESGLLDPIVRVTFHGYTASTRIIKQTLDPFWDQTLIL
PPRTIYGTKEYIKSNPPKAILQVYDEDICGFKEFCGRCTTIPLVKLAEETYSPPNFPPKL
EWYKFKSQRDFSGSVLAAFELIETMDDKSVDKIIDSSMQDVIYNIPEDIRPKMTSYRLEV
IFWGVRDMKKINCMPVLNPQIVIECAAVQVKSEVMENAKKFSNYKQTYVVVELDMPELDI
YYPCITIKAYDSRGFGCFKYVGICIIPSVYVFLEQLITEEDYDARIHGTKSILKSPWTKR
QSVTISPLPIDYDPLKEDENKELIPYKKMYKKKSWIRKILRSLKKIFAHVIPRKKKKKKI
DYKPEEDQSLDWWSKYFASMEVYNGELEMQPQFAGFQDRLRSFELWKGKKSEDPDYDTDN
YVGKFKGRICVYHWPHPNNLPCKTKSGRNAANGLYGDYPQSDPIKFLVRLYVVKGIDLQP
SDPLSGKSDPYLCVKLGKTFINDKKNYIPNQLNPIFGRLFEIEATFPQDYMMIIQVWDYD
ATTTDDLVGQTKIDLENRFYSRHRATCGISKTYNEGGYNKWRDRERPTQILEQLCKRNNL
PLPEYRKHYVRIGRKRFPFVNEQAENERQECMALNVLHQWQDFPICGCILVPEHVERRPL
FNATRPGLEQGKLELWIDMFQSNELPPKPAVNISPPVPEEYEIRVIVWNTEDVPLVDSQF
LTGEKCSDIYVKGWIVYDDYQRTDIHYNSLTGEGNFNWRFIFRVMYCKGERVMIVRKKTS
IFAISETEDKLPCRLHLQVWDSDHFSSDDFLGALTLDLAKMPRGSPNSKNCTLELLNPNL
PTIDMFKVTRIKAWWPLERSVNAAQYVQAGKIELEISILQAKEADEQPAGKGRDPPQNLP
APKYDDT
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgagccccaggaaaactcggtcgaatgtctatcagatttgcataaagattctgaaagcg
aaacatttgccccaaaatgcaaatcctatggtcgtggttaaagtgggaaatcggaggaaa
aaaacggtggttcgcgaaagaacggattcaccaatctataatgaatatttcgtgttcgat
cttttttgcaacttaaacgaacttttaagcactaaaattacgatagctgtatatctgaag
ggttatttacgtctcaagtttcatggaagtacgactttcgaagttgctctcgtttgggat
caaccagatcatcaatattatcacaaatgggcaatgctgacaaatccaaaggatgtttct
gcgggaccgaaaggttacgtcaaatgtaatatcgcgattaatgtgaaaggagagaaattg
aaagtacatccggatacagagggcgaggacgacatcgaagggaacctcttgttgcctgtc
ggtggtgaatttctaccctataggcaacgagcgtgctacatttttacgatttatcgagct
gacgggttaccagatatgagcagcctatgcgtaaaaaatgatttcgaaaatattaatccg
ttcgtgcagatatcgttcgctggaatgaaggaaacgacgagcgaagcatggcaaacctac
aggccgcgatttaatgaaaagattacgttcagagaaatgttcccatcactgtgtcaacgt
gtcaggattgctatcaagcatcgtgttaatagctgtcgaacgtgtgtcgtggcttcttat
attctcaacatgagcaaaatatcgaattctggagagtatggtttcctaccgacctttggg
ccatcgttcctacacttttatgggtccgggactacagaaaggaacagctgttttggcaag
tgctcgatagcccttcctttttatcgcggtagagttcttctctccttaaaaactgaaatg
gatgactcagaaacaacaacggctggaatcagtgctgaaagagagctcgtggctcctatt
atcgagagaagcttgtggaagacggaagaatattacctggtcactgtgttatacgatata
agtatgatcgatcggggaaaattttggtcgaaatcgataagcttcgaggttagcctcggg
aatgccggtaacagacaatttgctcgcagccaatgctttgaggacaataacgatggttct
ttacgaatgatcgaaatatgggacccgccactcgaacttccataacgaaactacgtttcc
actctccaattacttgttaatacgaacgacaagttacgctatgtacggttgccctatgta
aaatatgatcaattttcaacaggaaaccagatgccagaccgtaaaccggagttcgaaagc
gagaccctgccacgattgactggaacattggatggcaaatataattacgtgcctcttggc
tcgcgaaaaccctgcctctacgttagatcttggtggccgaatctcgattggcgaatgcac
aacagtaacaacttagctttcatcgccgatttcctagagcaaaagttggaacaactagag
gacatggtcgagctccaacatccagacacttacaaattctacaacgagacgattcgtacc
atgaagagccattgcatacattatttgcatacattagacacggggcgatacgatgacgaa
ggtggcaccacgaagctcgatcgccatcgcgtgaatctatgccataaagagatcgagaat
atcctaaagaggatcaagatcaacggcgaacttcccagtaatcactacacgagaatcgca
atggcacatgcgtatcagtatctggctaaagtgaaaaagctacgggaagaccatggccta
cctgacgttttcatttggatgatagccggctcgaaacgagtggcgtacgcacgatttcca
gccgaacgaattatttattcagaagaaatgaccgaaaggggatcattatgcggtcagagg
gttgacgtatttttggtacatccacgggatgaggaaggtgccgattacatggcctgcaag
cttgaactcttcctgtggcttggaaacgccgagtatataggagcttgttgggcctcgatt
ccacccggttacaaggtggaccatgagagaaacattgattcgtttcccaaatatttggag
tacacacgttccacgacatttcagttgcgagctcacatattccaaggtcgctttgatcct
ggcatggatgaatccggtttattggatcccatcgtgcgtgtcacgtttcacggttacacg
gcctccaccagaattattaagcagacactggatccgttctgggatcaaactctgatacta
ccgccgagaactatttatgggacgaaagagtacattaaatcaaatccgcctaaagcgatt
ttgcaagtgtacgatgaggatatatgcggcttcaaggagttctgcgggagatgcacaact
atcccattagttaagctggcggaggaaacttactcgccgcctaatttccctccgaaactc
gagtggtacaaatttaaatcgcaaagggatttcagcggctcggtgctcgctgctttcgag
ctcatagagacgatggacgacaagtctgtggacaaaattatagactcctcaatgcaagac
gtcatttacaacataccggaagacatcaggccaaaaatgacgagttacaggcttgaagtt
atattttggggcgtacgagacatgaagaagattaattgcatgccggtgttaaaccctcag
attgttatagagtgtgccgccgttcaagtcaagtcagaagtgatggagaatgccaagaaa
ttcagtaactacaagcagacatatgttgtcgtcgaactggacatgccagagctcgatatc
tattatccctgcatcacaataaaagcttacgactcacgaggatttggatgcttcaaatac
gtcgggatttgcataatacccagcgtttacgtctttctcgagcaattaataacagaggag
gattacgacgcgcgtatacacggcaccaaatcgattttgaaatctccatggactaaaaga
caatctgtcacgatttcacctttgccgatcgattacgatccattgaaagaagacgagaac
aaggagttgataccgtacaagaagatgtacaagaagaaatcatggattaggaaaatatta
cggtccttaaagaagattttcgcgcatgtgataccaagaaaaaaaaagaagaagaaaatt
gactacaagccagaagaggatcagtctctcgactggtggagtaaatacttcgcttccatg
gaggtatacaacggagaactggagatgcaaccgcaattcgccggctttcaggatcgtctg
agatcgttcgaactatggaaggggaagaaaagcgaggatcccgactacgatacagacaat
tacgttggaaagttcaagggacgcatttgtgtatatcactggccgcacccgaacaacttg
ccctgcaaaacgaaaagcggcagaaacgcggctaatggtctgtatggcgattatccacaa
tcggatcccatcaaatttctggtcagactttacgtcgtgaaaggtatcgacttgcagcct
agcgatcccctcagcggaaaatctgacccgtatctgtgcgtcaagcttggaaaaacgttt
atcaatgataaaaagaattacataccgaatcagctaaatcccattttcggacggctcttc
gagatagaagccactttccctcaagattacatgatgatcatacaagtatgggactacgat
gcaactacgactgacgatttagtaggacagacgaagatcgacttggagaatcggttctat
agcagacaccgagctacttgcggtatttccaagacgtacaacgagggagggtacaataag
tggagagaccgcgagagaccgacgcagatactcgagcaactttgcaaaaggaacaatctc
ccattgccggagtaccggaagcattacgtgagaattggacgaaaaagatttccattcgtc
aacgagcaagcggaaaacgagaggcaagaatgtatggcactgaacgtccttcatcaatgg
caagatttccctatttgtggctgcatcctggtgcctgaacacgtcgaaagacgcccgctt
tttaatgccaccaggcccggattggagcagggtaaattggaactttggatcgacatgttt
caatctaacgagcttcctccgaaaccggcagtgaacatcagtccacctgtaccagaggaa
tatgaaatccgtgtgatcgtttggaacaccgaggacgtgcccctcgtcgacagccaattc
cttaccggagaaaagtgttccgatatctacgtgaaaggctggattgtttacgacgattat
caaagaactgacattcattataattccttaaccggagagggcaatttcaattggcgattt
atatttcgcgttatgtattgcaagggtgagcgcgttatgatcgtacgcaaaaagacatcc
atctttgctataagcgaaaccgaggacaaactgccatgtagattacacctgcaagtttgg
gacagcgatcatttctcttcggacgattttctcggagcattaacgttggatttagccaag
atgccacggggaagtccaaattctaaaaactgtactttagagctactcaatccgaatcta
ccaacgatcgatatgttcaaagtgacacgaatcaaagcttggtggccattggagcgtagc
gtgaacgcagcccaatacgtgcaggcgggtaaaattgaactggaaatatcaatattgcaa
gcgaaggaggctgacgagcaacctgcgggcaaaggaagggatccacctcaaaatcttcct
gcaccaaagtatgacgatacttaa
DBGET
integrated database retrieval system
