Bombus vancouverensis nearcticus: 117159240
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Entry
117159240 CDS
T07628
Name
(RefSeq) integrator complex subunit 1 isoform X1
KO
K13138
integrator complex subunit 1
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117159240
Spliceosome [BR:
bvan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
117159240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Cnd1
Motif
Other DBs
NCBI-GeneID:
117159240
NCBI-ProteinID:
XP_033194804
LinkDB
All DBs
Position
Unknown
AA seq
2074 aa
AA seq
DB search
MDRGKAGIGRGAKSKIAQHPSDLFALGSKGSRNENSDVKRPGVIHSKQSSNTSTSGTDRK
REAPSGSLQSFQYIPQKKPKLAAHVSHQRPPFSSAEAWELVAIDTDPADFVPMVLEANDN
DEGDKVIGIICGAIKTLKNQKWKPDTLVYMGLLYLAKIRPSMFSNDCILHALSSLLKRDQ
GHNYKTKGNPLVPVLAANLLMKGFHDKRNWPEIFVKLYIEDALGERVWVDHEECKGFVDN
ILTGFNTRHPPKSVLQPELSVLTPRDCHSPSTIDDEDPGSSSVQFSGDKEKIEFPITPRY
THCIENIEFIVLEAVKEQLNRRQPESITKNFLKLLSSACGFVEIRNIAVPRLEVWLHNPK
LMRPAQELLSYICYNCTSHTQRDVEVISQLVKMRLKTKAVINLYLNGVKELIGLHPENLC
TILKHTIYNELSNARNPNNMPMIGVMFQTLSEQAAKLLAEIFQDLLMNREDYLRPLRALL
REIVRVCRHDINLLIFARTLMSERQDIAQQLLNFEFKERVFISIADLLCLCMLLAISPQV
KEAAALAQRGDKKDIALLHQFQNMVATIQFEAVLWLQNSAPQMYAIGKNELLHALHKILL
LEPPEQYYKLDNWPPESDRVFYLRLISDVPLLQNTLLRLLLIGFSKENGITHSETLDLVD
QLVRRAAANSTESFPTLQADKLDIIELIFNLCIYQPPGTINIPSNYVPPTLAISNLYWKG
WIMLLILAAHNPSTIGAVAWKRYPILRTLMEMCITNHFSYPPPTMALPEIIEQERSKELQ
VEAIEKQEILEYESHLAAASTRIQISEQNSLLLSQLMTMEPTGIARRPPPAVLEQIQSLN
VSHRLGHLLCRSRKPDFLLDIIQRQQQSSSQSMPWLADLVQNSEGSLSQLPVQCLCEFLL
STSTQAVEKQPRQQQLLAHLQMLLTDPEQDRQHAYEVLEYFLRRLSSQQTGSRLQAITGL
KMVLGSIPTEEEPMDIDGENEKEIWLLRKLPSIPHFLSVRSLVSTALRGACQVENNPDLV
HAYISYLAAHTTDDDLPDLTDLVNEIAQLVVERSTIIAAILPQPEIDNPPNKAAKQTLHA
FMVIFCNYLEKARSPRAEEYTWSESQDQILVQWSTGEECTMHILVVHAMIILLTYDSDDD
VLFDALLETWFPLNTEPPKAFLVDTSEEALLIPDWLKLRMIRSSVPRLIDAALKDLEPQQ
LVLFIQSFGIPVPSMTKLLHTLDTGVQIDPSSVGEAVLDKTYMAQLVEVQHRRGATGGLV
FVQVLQLMEPELPDENAVTIAQLQEPLPLSAVVQIQSVIQSSVKTDVPHLINRLFIENIP
MNQKVDAYRRLHKTLAKDLQKSAKESGAAVLAIQHICSVLSSMQVKQFLASLVHMPQYSC
TLMRVILLPLKKPSTSKQVVELARNMCLNLIQLIGDVKAPVLSILRDFANVQLTKTPKSM
ELTMLMQNRDPGSILESTDPVNLEAVGRKLLNICLKQQKTDVLVEAMARLLVNDSNEGIL
KPRTGVLIDWLASVEPELIGTCPTLQMKLLFGKTKIQMKVDNNVMSSHSFRPYLLTLLTH
RASWATLYKCVGHLLDKCDDGYDPTAVLDFLWALTCNPKLWQGRDKFTPKHYVPENILLL
HEKQLLTLVAYIVAEAVIIYNCQNRNIALARMDSRLDLLLHCVSTDDHLVASVVKYLAAR
MMNDSDIDSDMVHQFLLHMYMKIPKVICYLDTFQTKKFVGGAKITKWTGSVLDCMSHSLL
TALAATPRQKSWNSRSQDFELCARKMAAVHPILVLRQLPMLASSLMGRSYLDFSQFRAGH
HLNLFVQIMGLLELLQPHLFSEEHQTALEDTLENYFQCFQNYGPVKDLIPLLNRFITLLQ
AYISYNAQRALKYLQKHAQALHELQVHYPNLVTLRTLVSGIPMPREGEDIEEILITVPPT
PPPTESIIPQHWPSLLTTLSKLQGEDVFSALQEIEHLSSRKPSVLESITDNIAELLVSPQ
SNIRSLAHTLLARALKHRPASNANILSAFQRCLDSSRADILMSALEKLPEIVLCMQEHAL
PLMQKVFELGVNSNVNTIPYINKTIALLNTQQGC
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtggaaaggcaggaattggcagaggtgcaaaaagtaaaattgctcagcatcct
tctgatttatttgcacttggatccaaaggttcgcgtaatgaaaattctgatgttaaaaga
ccaggtgttattcattctaagcaaagtagtaatacttcaacttctggaactgacagaaaa
agagaagcaccatcaggatcacttcaatcttttcaatacatcccacaaaaaaaacctaaa
cttgctgcacatgtttctcatcaacgaccaccattctcaagtgctgaagcttgggaattg
gtagccatagatactgatccagcagattttgttccaatggtcctagaagctaatgataat
gatgaaggtgacaaagttataggcattatttgtggtgccataaaaacacttaaaaatcag
aagtggaaaccagatacattggtatacatgggattattatacttagcaaaaattcgtcct
tctatgttttcaaatgattgtatattacacgcactatcctctttattgaaacgggatcaa
ggacataattataaaacgaaaggaaacccattagttcctgtacttgcagctaatttgtta
atgaaggggtttcatgataaaagaaattggccagaaatctttgttaagctatacattgag
gatgctttaggtgaaagagtatgggttgatcatgaagaatgcaaaggttttgtagataat
attttaacaggatttaatacaaggcatccaccaaaaagtgtcctacaaccagaactatct
gtattaacaccacgagattgtcatagtccatctacaattgacgatgaagatccaggatct
tcatctgtacagttttctggtgacaaagaaaaaatagagtttcctattactcctagatac
actcattgtatagagaacatagagttcattgttcttgaagctgtgaaagaacagttgaat
agacgacaaccagagtcaattaccaaaaactttctaaaattactttcttcagcctgtggt
tttgtagaaatcagaaatattgccgttccaagattagaagtatggttgcataatccgaaa
ctaatgagacctgcccaagaattactgagttatatttgttacaattgtacttctcataca
caaagagatgttgaagttataagtcaattagtaaaaatgagattgaaaactaaagctgta
attaatttatatctaaatggcgtaaaggaattaatcggcttgcaccctgaaaatttatgt
actatcttaaaacatacaatttataacgaattatctaatgcaagaaatccaaataatatg
ccaatgataggtgtaatgtttcaaactttatccgagcaagcagctaagttacttgcagaa
atatttcaggatttattaatgaaccgagaagattatctgagacctttacgtgctttactc
agagaaatcgtacgtgtttgccgacacgatattaatttacttatttttgcgcgtacattg
atgtccgaaagacaggatatagcgcaacagttgcttaattttgaattcaaagaacgagtc
ttcatttcaattgcagatttattgtgcttatgtatgttactagctatcagcccacaagtt
aaagaagctgcagcattagcacaaagaggtgataaaaaagatatagctttattacatcaa
tttcagaacatggtagcaacaatacaattcgaagccgtgttatggctacagaattcggcg
ccacagatgtacgccattggaaaaaatgagctccttcatgccttacataaaattttactg
cttgaaccaccagagcagtactataaattagataattggccacccgaatctgatagagta
ttttatttacgtcttatttcggatgttccattattacagaatacattgttaagactatta
ctgattggtttttcaaaagaaaatggcattactcattcagaaacattagatttggtggat
caattagttagacgagcggcagctaactcaactgagagtttcccgacattacaagctgat
aaattggatataattgaacttatttttaacttgtgcatttatcaaccaccaggaactata
aacataccgtcaaactatgtaccacctactttggcaatatcaaatttatattggaaaggg
tggataatgttattaatactggctgctcacaatccttctactattggtgctgttgcatgg
aagaggtatcccattttacggactctaatggaaatgtgtattacgaatcatttctcctat
ccaccaccaacgatggcattaccagaaataatagagcaagaacgttcgaaagaattgcaa
gttgaagctatagagaaacaagaaatattagaatacgaatcgcacttagctgctgcatca
acaagaatacaaatatcagaacaaaacagtttattactatcacaactaatgactatggaa
ccaactggaattgctaggagaccacctccagcagtattggaacaaatacaatcattaaat
gtgtctcataggttgggacatctactttgtcgatctcgtaaaccagatttcttattagat
ataatacaaagacaacaacagagttcgtctcagagtatgccatggctagcagatcttgta
caaaatagcgagggatctcttagtcaattacctgtacagtgtctttgtgaatttttatta
tctactagtactcaagctgtggagaagcaaccaagacaacaacagctattagcccatctt
caaatgttattaactgatcccgaacaggatcgacaacatgcttacgaggttttagaatat
ttcttaagaagactgagcagtcaacaaactggcagccgccttcaagcaattacaggtttg
aagatggtacttggatcaatacctactgaagaggaacctatggatatagatggagagaat
gaaaaggagatctggcttcttcgcaaattaccgtccatacctcatttcttatcagtacga
tctttagtttctactgctcttcgaggtgcatgtcaagtcgaaaataacccagatcttgta
catgcgtacatatcttatcttgctgcgcatactacagacgatgatttacccgatttaact
gatttagttaacgaaatagctcaattagtagtcgaacgaagtacgattatagcagctatt
ctaccgcaaccagaaattgataatccaccaaataaagcagctaaacagactctgcatgct
ttcatggtgattttctgtaattatctagaaaaagctcgatctccacgagcagaggaatat
acctggtctgaaagtcaagaccagatattagtacaatggagtacaggagaagagtgtact
atgcatattttagttgttcatgctatgataatcttattaacgtacgactctgatgatgat
gtattgtttgatgctttacttgaaacttggtttccattgaatacagaaccaccaaaagct
ttcctcgttgatacaagcgaagaagctttattaatacctgattggttaaaactaagaatg
attagaagtagtgtaccacgtttaattgacgcagctcttaaagatttggaaccacaacaa
ctggttctttttattcagagcttcggtattcctgttccttcaatgactaaattactccat
acattggatactggtgtgcaaattgacccgagttctgttggtgaagcagtactcgataag
acgtatatggcacaattagttgaagttcaacacagaagaggggcaacgggtggactagtc
tttgtacaggttttacaattgatggagccagagttacctgatgaaaatgctgtaactatc
gcacaattacaggaacctttacctctaagtgctgtagttcaaatacaatctgtcatacaa
tcttctgttaaaacggatgtcccacatttaatcaatagattatttatcgaaaatatacca
atgaatcaaaaggtagatgcatatcgccgattacataaaaccttagcaaaagatttgcag
aaatctgctaaagaaagtggagctgctgtgttagcaatacaacatatatgtagtgtatta
agttcaatgcaagttaaacaattcttagcctcgcttgttcacatgcctcagtattcttgc
accctaatgcgagtaatattgttgcctttaaaaaagccatcgacttcgaaacaagtggtt
gaattagcccgtaatatgtgtctaaacttgatacagctaataggagatgtaaaagcacca
gttctatctattttaagagactttgcaaacgtgcaattaaccaaaacgccaaaaagcatg
gaattaacgatgttgatgcaaaatcgggatcctggatctattttagaaagcacggatcca
gtgaatttggaagcagttggacgtaagttattaaatatttgtctgaaacaacagaaaacc
gacgttcttgttgaggcaatggcaagattactagtaaatgatagtaatgaaggcattttg
aagccacgaactggtgtattaatcgattggttagcatctgttgaaccagaattaattgga
acatgtcctactctccaaatgaaacttttatttgggaaaacgaagatacaaatgaaagtt
gataacaatgttatgagttcacattcatttaggccctacttgttaactttattgacgcat
agggcaagttgggcaactttgtacaaatgtgttggacatttattagataaatgtgatgat
gggtatgatccgacagctgttctggacttcttgtgggcattaacttgtaatccaaaactc
tggcaaggcagagacaaattcacgccaaaacattatgttccagaaaatattttactttta
cacgagaaacagttactaacacttgtagcgtatatagttgcagaagctgttatcatatat
aattgtcaaaacagaaacattgcacttgctcgaatggattctcgtcttgatttattatta
cactgtgtttctacagacgatcatttggtagccagtgtagtaaaatatttggctgcacgt
atgatgaatgactcagatattgattcagatatggtccatcaattcttgttacacatgtac
atgaaaatacctaaagtaatatgttacttagacacatttcaaactaaaaagtttgttgga
ggagcaaaaattacaaaatggacgggttctgtgttagattgtatgagtcattctttgtta
actgctctagcagcaacaccgcggcaaaagtcatggaattctagatctcaagacttcgaa
ttatgcgcccgaaaaatggctgctgtgcatcctattttagtgttacgacaacttccaatg
ttagcgtcgtcactaatgggaagatcttatttggattttagtcaatttagagcaggtcat
catctaaatctttttgtacaaataatgggattactggaattactacaaccacatttgttt
agtgaagaacatcagactgctttggaagatacattggagaattactttcagtgcttccaa
aattatggtccagtaaaagatcttataccactcttaaatagatttattacattactacaa
gcatacatctcttataatgcacaaagggcattgaaatatttgcagaaacatgctcaggct
ctacatgaattgcaggtacattatccaaatctagttacacttagaacgcttgtatcaggc
attccaatgccaagagaaggagaagacatagaggagattttaattactgttcctcctact
ccacctccgacagaatccattattccacagcattggccttcattgttaactacattatct
aaactgcaaggtgaagatgtatttagcgctcttcaagaaattgagcatttgtcatcacga
aaaccttcagttttggaatctataacagacaatatagcagaattgcttgtatctccgcaa
agtaacataagatctcttgctcatacattattagcaagagcattaaaacatcgcccagca
tcaaatgcaaatatcttgtctgcatttcaaaggtgtttggacagttctagagctgatata
ttaatgtcagctttagagaagttaccagaaattgtattatgtatgcaagaacacgcttta
ccgttaatgcaaaaagtatttgaattaggagtaaattcaaatgtgaatactataccatat
ataaataaaaccattgctctgctaaatacacaacaaggttgttaa
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