Bombus vancouverensis nearcticus: 117163389
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Entry
117163389 CDS
T07628
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117163389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117163389
Enzymes [BR:
bvan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
117163389
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117163389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF3364
Motif
Other DBs
NCBI-GeneID:
117163389
NCBI-ProteinID:
XP_033201516
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MVIILYRAMSSLTLSKLKKAPIGKIDKQRKKINRFDGLTEEEVQKYTLPDYLEMNLDIVF
VGINPSLMAAHRGRYYAGPGNHFYKLLHESRLTSRCLSYEEDHKLLQFRIGLTNIVPRAT
KSSADLKRTEIKEGSKIVEEKLKLYKPKIAVFNGKCIYEVFANKTDNFNFGLQPEKVDET
AIWVTPSSSARCANFPRMTDKLHFFTSLKKYLQFLKGEIKDIDMKEFLFEGKCKQFIPQT
SKMWRRKNMSTFLHGGRIANKDTICLDTSDENVAIAHSTEFIVKKLEPDKSDKTDEIFDT
DESDSSQNFEACISQDIVKTFFGNDGTSQKEQSLAVKNVKIKQPNNQAMTSDIKKSKRQT
NRKEKKIVKRFPNKPVRSKDLENNTNDFINLIKQRLIGKLNNFDE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtgataattttgtacagagcgatgtcttcgcttactttgagtaaattaaaaaaagca
ccgataggaaagattgataaacaacgaaaaaaaattaaccggtttgatggattaacggaa
gaagaagtgcaaaagtatactttgccagattatttggaaatgaatttagatatagttttc
gtcggtataaacccaagtttaatggcagcccatcgtggtagatactacgctggtccaggt
aaccatttttataaacttttgcatgaatcaagactaacatctcgatgtttaagttacgaa
gaagatcataaacttcttcaatttagaattggtttaacaaacatagtacctcgagctaca
aagtcttctgctgatttaaagcgtacagagatcaaagagggttctaaaattgtagaagaa
aaattaaaactttataagccaaagattgctgttttcaatggcaaatgtatctatgaagta
tttgctaataaaacagataatttcaattttggattgcaaccagaaaaagttgatgaaact
gcaatttgggtcactccatcaagtagtgcgcgttgtgcaaattttccaagaatgacagac
aaattacatttctttacttccttgaaaaaatatttgcagttcctaaaaggagaaatcaaa
gatattgatatgaaagaattcttgttcgaaggaaaatgcaaacagtttattccacaaacg
tcaaaaatgtggcggcgaaaaaatatgtctacattcctacatggaggaagaattgctaat
aaagatacaatatgtctagatacatctgatgaaaatgtagcaatagcacatagtacagag
ttcattgtaaagaaacttgaacctgataaaagtgataaaactgatgaaatatttgataca
gatgaatctgattcatcacaaaattttgaggcatgtatttctcaagatattgtaaaaaca
ttttttggaaatgatggaacttcacaaaaagaacaatcactagctgtaaagaatgtaaaa
atcaaacaacccaacaatcaagctatgaccagtgatataaaaaaatctaaacgccaaaca
aacaggaaagagaaaaagattgttaaaagatttcctaacaaaccagttagaagtaaagat
cttgaaaataacactaatgattttataaatttgataaaacaaagactgataggaaagcta
aacaattttgatgaatag
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