Bombus vancouverensis nearcticus: 117163421
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Entry
117163421 CDS
T07628
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03440
Homologous recombination
bvan03460
Fanconi anemia pathway
bvan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117163421
09124 Replication and repair
03440 Homologous recombination
117163421
03460 Fanconi anemia pathway
117163421
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bvan01009
]
117163421
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvan04121
]
117163421
03036 Chromosome and associated proteins [BR:
bvan03036
]
117163421
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117163421
Enzymes [BR:
bvan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117163421
Protein phosphatases and associated proteins [BR:
bvan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117163421
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117163421
Multi subunit type E3
BRCC complex
117163421
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117163421
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117163421
BRCA1-A complex
117163421
BRCA1-B complex
117163421
BRCA1-C complex
117163421
BRCA complex
117163421
FA (Fanconi anemia) pathway
Downstream FA components
117163421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-rbx1
TRAF3_RING
zf-RING_4
Prok-RING_4
RTT107_BRCT_5
zf-RING_10
zf-Nse
AT_hook
zf-RING_6
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117163421
NCBI-ProteinID:
XP_033201563
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MMKEVFITAEKLAEEIRNIQKCLQCTICLNTISEPVKTLCGHRFCRQCIQTLLQSKNALC
PLCNRAIQRRSISKDEHMILYIDGLQKLIEAVQSDSGICILSHLSRPRCTQQSESSSNTE
FSICNTKELIKPSCSYVDTSLQKEAVSKKKRGRPRKNLTSQKSETKSTQKKGGAITKYLS
KCGLSGIGQLNESNDSLDENQSQSKVTTWLENLSKQETLDSPYKTEIVQSPTCDFNDTLI
MSVSQNDSQIKIDNFDKDVDTRMKDDASQPVRQVRRTSLKSENNESDSNNTSDRRTSTET
KTAIASSKLDFDTMNPKPSTSRMTRSFDDSKEKSEEKFIDVNRTSPCDMLSSMQKNWSSV
EKFGKEMRKRKKRLKSLNVSIENKGKSRSVNEATANLNKEENAKPKVVDDIGNGRTRKRK
GSVMAEDVANVAVDERFDDGKKSSAKSDFVDARDALSPRDRKDRSMSEKVQSTTESSFIT
LEEGRQVHIRYLNTCQMNTIIGVTYEDSRADIEADQTNNGEETMLPTKRHVDPFDTPFYD
RDKIFSQASLVKSNSDQGGPNLLDESRNEENCSPTPTKKITMIDEADSTSNLQTSTPHRR
RLSLKRKSTEFKLNNSPSPIVDSRVGLQAVRRDLRFEIERESDQADGNVGADKRSPEEAI
GTQKRRASTDDKLDGKRVRGLTATSTEFANRRLENSGCNVSLVTFRKLGKTFKRCRKRIP
FLYLGTTKRKAMVGHYPGFHLQRPCNPIDILDTLDYTIQDGFGNNALIALNDTQIIDEDE
GKEVEPVATVSTVTEAIVFNNQIDYREENPPEEIQEKIVSVVEIPDSVENKSPDIDVLLV
SLSANKEPYLLPCDEQCAKSNNTSTKNTVKMIPSANDSQLQFLSLKSPPIDISQTQKLIH
ETEPDTETNKVSVSGGFLHMSDQCDSPRTPVRKRKRFDNQDKFSNRMKRQSIVSDEEDVC
SNHSFSSEVTCIRNDNKEVPFFQTNLDENCQSSDPSSRDTEIVPVSSSSNIAASEEGNKK
VFKRILPIASSSTDSPDIVSQAVSPTTKRKRDVSPEVSDGEWNAIVHNWVDERCKKKGKL
EQTRDSSNLMNASRAVKDNASLKSGSSDRDKSTNKLSTLQCRQQLDFAGRYSDEGTNFSG
SKWRKSLEPKNSSIAVEDSPDFELTIDRIKNIRNKTTELIQPDTYDDIIANADYEEVIIE
DDNGKNRKSRRESVECLEIDSYERKSKLARSCVESSYSSSKDVLCVRSNGSDKENNNQQI
SGALCDSDNENEEILLPVYVNMVNESSRKNRLQENSFKSSGNESICISNKSLRQGSMTSS
SQKHPTNASVSNSTIKDMSEHDSLMDITQHDLMIKQFEMDLFEKNYKNSNVPLEMEKKIL
QTPKHNKKCSNADGKDVEHSGEEDDIVENTPNTKTKNLGAINSTQRSVISSSSVSKTSEK
TLPAKILQSATGRCLTNISTPNSTISIPPLYQSTPKMHQSTCNNATKLVPRANEPSNKQT
KDSIQRNMNRSVQGNTVQRTNNIEESVQIINNSEDNIVKSTNNVRGVEKNIAQRAHYTNR
QKFCFVCSGLTIHEIDLVKKLTQMLDGRYLAQFDKDVTHVIVKADKNNGASNTLKYLQGI
VHRKWIVSYQWVVDSVKERRLVNEEPYEVVDSKTLEEGPRKSRCREKGLFEGFCFLCIEP
YINVSIEQYQDLLRATGAIVVDSLCALAAEKNLMKIILIQADLHEFQIIEWYKQTRAIAI
VDEWIVECISQYKLISFYPYLQELSRQDVLALGYPEYLVEEETGWDSDSTCDL
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggaagtgttcattactgctgaaaaactagcagaggaaattagaaatatacaa
aaatgtttacaatgcacaatttgcttgaataccatatctgagccagtgaaaaccctttgt
gggcatcgattctgtcgccagtgcattcaaacgctattgcaaagtaaaaatgctctctgt
ccactctgcaaccgtgctatacagcgtcgcagcatttctaaggacgaacacatgatatta
tacatcgatggactgcagaaactaatcgaagcggtgcaatcagattcaggcatctgtata
ctgtctcatttatcgagaccacgctgcacgcaacaaagcgaatcgtcaagtaataccgaa
ttcagtatatgtaacacaaaggagttgatcaaaccgagctgttcttacgtggataccagt
ctacaaaaggaagccgtttccaaaaaaaaaagaggtcgacctcgaaaaaacctgacatca
cagaaaagcgaaacgaaatctacgcagaagaaaggcggcgctatcacaaaatacttatca
aaatgtggtttgtctggcataggacagttaaatgagtcgaatgattctctagacgagaat
cagtcacagagcaaagtaacaacctggctggagaatctgtccaagcaggaaacgttagac
agtccttataaaactgaaatcgtacagtctccaacatgtgattttaacgacacgttaatt
atgtcagtttctcaaaacgattcacagatcaagatcgacaattttgacaaagacgttgat
acgaggatgaaggatgacgctagtcaacctgtcagacaggttcgaaggacatctttgaag
agcgagaataacgaaagcgattcgaacaatacgagcgatcgcaggacgtctacggagacg
aagactgcgattgcttcgtcaaagctggactttgatacgatgaatccgaagccgagcacg
tcgaggatgacgagatcgtttgacgatagtaaggaaaagagcgaagagaaattcatagac
gttaacaggacgtcaccctgtgacatgttgtccagcatgcagaagaattggtcctctgta
gagaagtttggcaaagagatgcgcaagaggaagaagagattgaaatccttgaacgtgagc
atcgagaacaagggaaaatctcggtcagtgaatgaagctacggcgaacctgaacaaagag
gaaaatgcgaagccgaaagttgtcgacgacataggtaatggacgaacgaggaaaagaaag
gggtcggtgatggctgaagacgtcgcgaatgtcgccgtggacgaaagattcgacgacggg
aagaaaagttcggcaaaaagtgattttgttgacgcgagagatgcgttgtccccgagggat
agaaaggatagatcgatgtcagagaaagttcagtcgaccactgaatcgtcctttatcacg
ctagaagagggtaggcaggtacacattcgatatttgaacacctgtcagatgaacacgatt
atcggcgtaacatacgaggattcacgagctgacattgaagcggaccaaacgaataatggc
gaggaaacgatgctccctacaaagcgacacgtcgatccattcgatacgcctttctacgat
cgagataagatattttctcaagcgtcgctggttaaatcaaacagtgaccaaggtggaccg
aatctgcttgatgaatcgcgtaatgaggaaaattgttctccgacaccaacgaaaaagatt
acgatgatcgatgaagctgattctacctcaaacttacaaacttcaacgcctcatcgcaga
agattgtctctgaagagaaaaagtacagagtttaaattgaataattctcccagtccgatt
gttgattctcgtgttggtctgcaggctgttagacgagacttgagatttgagattgagcgt
gaaagtgatcaggctgatggaaacgttggcgcagataagagaagtccggaggaagcaatt
ggaacacagaaacgtagagcttctacagatgataaactggatggtaaacgtgtcagaggc
ttgactgccacttcgaccgagtttgcaaacaggaggctggagaacagcgggtgcaatgtg
tccctggtcacgttcaggaaactagggaaaactttcaagcgttgcagaaaacgaattccc
ttcttgtatctgggaacaaccaaacggaaagcgatggtgggccattatccagggttccat
ttacaaagaccgtgtaatccgattgatatattggacacgctggattatacaattcaagat
ggctttggtaacaatgcactaatcgcgttgaacgatacacagataatagatgaggacgaa
ggcaaagaagtagaacctgttgcgacagtaagtactgtaactgaagcgatcgtcttcaat
aatcagatagattatcgtgaagaaaatccgcctgaagaaattcaggagaaaattgtttca
gttgttgagatccctgacagtgttgaaaataaatctccagatatagacgtactcttggta
tctctgagtgcaaataaagaaccatatctcttaccatgtgacgaacagtgtgctaaatca
aataatacgtcgaccaagaataccgtaaagatgataccatcagcaaatgactcccaatta
cagttcctctctttaaaatcccccccgatcgacatttcacagacccagaagctgatccac
gaaactgaacctgacacagagaccaacaaagtctctgtctctggaggtttcttacacatg
tcagatcaatgcgattctccccgtacgccagtgagaaaaaggaagagatttgataatcaa
gacaagttctctaatagaatgaaaagacagtctatagtcagcgacgaggaggacgtttgc
tccaatcacagtttctcgtcagaggtcacgtgcattaggaacgacaacaaagaagtccca
ttcttccagaccaatttagacgaaaattgtcagtcctctgatcctagcagcagagacacg
gaaatcgtgccggtaagctctagctcaaatattgcagccagcgaagaaggaaacaagaag
gtgtttaagagaattttgccaatcgccagttcaagcactgattccccggacattgtctct
caagccgtctctccaacgaccaagcgaaaacgagacgtttctcctgaagttagcgacgga
gagtggaacgcgatcgtgcacaactgggtcgacgagaggtgcaaaaagaaaggtaagttg
gagcaaactcgtgattcctctaatttgatgaatgcgtctcgcgcggttaaagacaacgct
tcgttgaagtctggctcgtcagatcgtgacaaatctaccaacaaactgtctacgctgcag
tgtagacagcagttagacttcgctggtagatacagcgacgaaggaaccaatttcagtgga
tccaagtggaggaagagtttggagcctaagaattcgtcgattgctgtcgaggactcgcct
gattttgaattgacgatagatcgaattaaaaatatacgaaacaaaacaacggaactcata
cagccggatacttacgacgatatcatagcaaatgcagactatgaagaagtcattatagag
gacgataatggaaagaacagaaaatctagaagagaatcggtcgagtgtttggagatagat
agttacgagagaaaatctaaattagcaagatcgtgtgttgaaagttcttattcgtcgagt
aaagatgttctgtgcgtacgttctaatggatctgataaggagaataataaccagcaaata
tctggtgcattgtgcgatagtgacaatgagaatgaagagatactgcttccggtatatgta
aatatggttaatgagagttcgaggaagaatagattacaagaaaattcattcaagtcatcc
ggcaacgaatcgatatgtatttcaaataaatcattgagacagggatcaatgacttcttct
tctcaaaagcatccaacgaatgcgagtgtgagcaattctacaattaaggatatgtccgaa
catgattctttgatggacatcacgcaacatgatctgatgattaaacaatttgagatggat
ctgtttgagaaaaattataaaaattctaacgtgcctttggaaatggaaaagaagattcta
cagacgccgaagcataacaagaagtgctcaaacgcagatggaaaggacgtcgaacactcg
ggtgaagaagacgacattgtcgagaacactcctaacacaaagacgaaaaatttgggagcg
atcaattcgacgcagagaagtgtgatatcgtcgtcctcggtttcgaagacctccgaaaaa
acattgcctgccaaaattctacagtcggcgaccggaagatgcctcaccaatatcagcact
ccaaattccacgatcagcattcctcctctctaccagagcaccccgaaaatgcatcagtct
acctgcaataacgccacgaagcttgttcctcgcgcgaatgaaccctctaacaagcagacg
aaggattccattcagcgaaatatgaatcgaagcgttcagggaaacactgttcaacgtaca
aataacattgaggaaagcgttcaaattataaataacagtgaggataatatcgttaaaagt
acaaataatgttcgaggcgttgagaaaaatatcgctcaacgcgcacactataccaacaga
cagaagttctgttttgtatgcagcgggctgacaattcatgaaatcgatctagtgaagaag
ttaacgcaaatgctggacggtagatacctggctcagttcgataaggatgtaacacacgtg
atcgtgaaagctgacaaaaataacggagctagcaacacgttgaaatacctgcagggtata
gtccataggaaatggatcgtgagttatcagtgggtagtggattcggtaaaggagcgaaga
ttagtgaacgaggaaccgtacgaagtggtagattcgaagactctcgaagaaggccctcga
aaatcgcgatgcagagagaagggtttattcgagggattctgctttctatgtattgaaccg
tacatcaacgtttctatagaacagtatcaggacttgctacgggctacgggtgccatcgtg
gtcgactcgttatgcgctctagccgctgagaagaatttgatgaagatcattttgattcag
gccgaccttcatgaattccaaattattgaatggtacaaacagactcgtgccatagcaatc
gtcgacgaatggatagtcgagtgtatcagtcagtacaaactgatatcgttctatccatat
ctgcaggagttgtcgcgacaggacgttctcgcgcttggttatccggaatatcttgtcgaa
gaagagactggctgggattctgatagcacgtgcgatttgtag
DBGET
integrated database retrieval system
