Bombus vancouverensis nearcticus: 117164721
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Entry
117164721 CDS
T07628
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04013
MAPK signaling pathway - fly
bvan04120
Ubiquitin mediated proteolysis
bvan04140
Autophagy - animal
bvan04144
Endocytosis
bvan04214
Apoptosis - fly
bvan04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117164721
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
117164721
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117164721
04140 Autophagy - animal
117164721
09143 Cell growth and death
04214 Apoptosis - fly
117164721
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117164721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117164721
04121 Ubiquitin system [BR:
bvan04121
]
117164721
Enzymes [BR:
bvan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117164721
Membrane trafficking [BR:
bvan04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117164721
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117164721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
RING_XB3-XBAT31
Sina_ZnF
zf-RING_6
zf-Nse
zf-TRAF
zf-rbx1
zf-ANAPC11
HOOK
Prok-RING_4
zf-TRAF_2
NBP1
bZIP_1
Motif
Other DBs
NCBI-GeneID:
117164721
NCBI-ProteinID:
XP_033203871
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MCCYIFANKGEKTNIILINDKMAKSDNFKDHVKIAEENIVCGDALKEYLEPRFECPICLT
WLRDPVLTSCGHKFCSQCIYTWLQKEGACCPVDSKSLKSENDLFRDLYTSREISQQRIPC
LYQQFGCEIKMSPMDIEAHINGCSYKRSLADSQTVYCSFKNVGCMKTFHTEEDLHAHLEG
NINIHLIMILNILTQLSVSKNNVDNIAAESKLWDPPPKNTTSIEKNEPPLEWQHLLKNLY
ERIVVLEQENKELSISISNYKTQLTTLQTSLRFSQEEMSLRSCNGVYIWRLHCFHEKLET
MMNDSLKMFYSPGFYTSPNGYKICARINISSKDPESLSLLLHIMKSENDDGLDWPFNGTM
YFVLVHPDNREKDIREITSSRPDLEAFRKPICELNKRSFGYTEFVRIRDLSDFLENDCLI
FRIEVHVYDKFKISI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgttatatatttgctaacaaaggagaaaaaacaaatataatattaattaatgat
aaaatggccaagtcggacaattttaaagatcatgttaagatagctgaagaaaatattgtc
tgtggtgatgctttgaaagaataccttgaacctagattcgagtgtcctatttgtttaact
tggctgcgtgatccagttttaacatcttgtggtcataaattctgttcgcaatgtatatac
acttggcttcaaaaagaaggtgcttgttgtccagttgatagcaaaagtttaaaatctgaa
aatgatttattcagagatttatatacaagcagagagatatcacaacaacgaataccttgt
ctctaccaacaatttggctgtgaaattaaaatgtccccaatggatatagaagcacatata
aatggatgctcatataaaagaagtctggcagattcacaaactgtctattgttcctttaag
aatgttggttgcatgaaaacttttcatactgaggaggatttacatgcacatttagaagga
aatataaatatccatttaattatgatcctgaacatattaacacaactatctgtttcaaaa
aataacgttgataatatagctgcagaatctaaattatgggatcctccaccaaaaaataca
acttctatagaaaaaaacgaaccaccattagaatggcaacacttattaaagaatctatac
gaaaggatagtggtgctggaacaagaaaacaaggaactatctataagcatttctaattac
aaaactcaactcacaactttgcaaacttctttacgatttagccaggaagaaatgtcttta
cgtagttgtaatggagtttatatttggagattacattgttttcatgaaaaacttgaaacc
atgatgaatgattcgttaaaaatgttttatagtcctggcttttatacgagccctaatggt
tacaagatttgtgctagaattaatatatcttctaaagatcctgaatctctgtcactcctt
ctgcatataatgaagtcagaaaatgatgatggtctagattggccattcaatggaacaatg
tactttgttttggttcacccagataatcgggagaaagatatacgagaaataacttcatca
agaccagatcttgaagcatttagaaaaccaatatgtgaactcaataagcgcagttttggt
tatacagaatttgtgcgaatacgagatttatctgattttttggaaaatgattgtttaatt
ttcaggatagaagttcatgtgtatgataaatttaaaatatcaatataa
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