Beta vulgaris (sugar beet): 104887251
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Entry
104887251 CDS
T03548
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104887251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104887251
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104887251
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
SMC_N
AAA_15
AAA
AAA_28
NACHT
AAA_25
AAA_23
AAA_33
AAA_5
AAA_30
AAA_18
AAA_22
SRP54
PduV-EutP
Arf
AAA_16
AAA_24
Zeta_toxin
AAA_14
Rad17
Motif
Other DBs
NCBI-GeneID:
104887251
NCBI-ProteinID:
XP_010670153
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Position
2:30673773..30685126
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AA seq
292 aa
AA seq
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MVQEMKNVESSTSIKVQAMQFAYPGQPPIFADFSLDISAGSRCLLVGANGSGKTTLLKIL
AGKHMVGGRDVVQVLNSSAFHDTRLVCSGDLAYLGGSWSKTIGSAGEVPLQGDFSAEQMI
FGVEGSDPDRRAKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKILLLDEVTVDLD
VVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGDLRKIEKLSELHELK
TSNNLLSVVESWLRSETKIEKKKPATTATQNQKSSGFDASPFRSSRHMAYYR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaaatgaaaaatgttgaatcatcaaccagtataaaagtgcaagccatgcaa
ttcgcgtacccaggccaacctccgattttcgccgatttcagtctcgacatttctgcgggc
tctcgttgtcttcttgttggtgctaatggatccggtaaaaccaccttgttgaagattctg
gctggaaagcacatggttggtggaagggatgttgtgcaggtcttgaattcttcggctttc
catgacacccgtcttgtttgtagtggtgacttggcatatttgggaggatcttggagtaaa
actattggctctgcaggcgaggttccactccaaggagatttttcagctgagcagatgatc
tttggagtcgaaggttcagatcctgatagaagagcaaaattaattgaattgcttgatatt
gatctgcaatggcgaatgcacaaggtgtctgatggtcagagaaggcgagttcaaatctgt
atgggtcttcttcatcccttcaagatcctcttgttggatgaggtgactgtcgaccttgat
gtagttgcgaggatggatttgctcgaattcttaaaggaagagtgcgatcagagaggagct
acaattgtttatgcaacccacatctttgatggtttggaaacctgggcaactcatctggcg
tacatccaagaaggagatttgaggaagatagagaagctgtccgaacttcatgagttgaag
acttccaacaatcttctgtctgtggtagagtcgtggctgcgttcagagactaagatcgag
aagaagaaacctgctactactgccacccagaatcaaaaatcatctggttttgatgcttca
ccatttagatcatcaagacatatggcctactatcggtga
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