KEGG   Beta vulgaris (sugar beet): 104888575
Entry
104888575         CDS       T03548                                 
Name
(RefSeq) uncharacterized LOC104888575
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
bvg  Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bvg03036]
    104888575
   03400 DNA repair and recombination proteins [BR:bvg03400]
    104888575
Chromosome and associated proteins [BR:bvg03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104888575
DNA repair and recombination proteins [BR:bvg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104888575
SSDB
Motif
Pfam: HATPase_c_3 SMCHD1_S5 HATPase_c
Other DBs
NCBI-GeneID: 104888575
NCBI-ProteinID: XP_010671900
LinkDB
Position
3:3797797..3818426
AA seq 1681 aa
MIEKKRKFHSDNEDKIYRFQVLLPNGISVKMVKRNPKDSSISLDVFVEIVKEKCYEILRQ
TEDFKNRRKIFWNSKELYLEDSKGFKIRSLLCYDKFKPNKTHYLRLFDGGANTVDTFENM
WDLTPDTDLLTELPEDYTFETALADLIDNSLQAVWSNGDGERKLISVEVYEDKISVFDTG
PGMDGSDENSIVKWGKMGASVHRTSKKLAIGGKPPYLTPFFGMFGYGGTIASMHLGRHAV
VSAKTKQSKKVYWLRLERDALLRQSGSDLNWKASGGLRDPSDREIELSPHGSFTKIVMKP
KLELPDIFQLQCKLKDIYFPYIQCDEISKTGRTTILVDFEINGINLAEVEGGEVAVTNLH
SSNGPDFVLNLHFSFEEDKAASKSPTIREGNARLKCVYFPNLEGKESIDKILEKLNSDGC
RIQEDYESFSRISIRRLGRLLPEARWDLLPFMKPRQKKGSKVETLKRCCPRVKCFIDTDA
GFNPIPSKTDLAPHDRFTKALKDLGGHTPQKEKVKVRICRGEKQLTLQQLEQEYQNWILQ
MHSQYDNEYEINCGDEKPDVLVAESIKELGITCDVVRVLKAISWKGRSWNRGQKVKILKG
ACSGCHKNNLFATLEYFLLEGLEEDTGGEARIICRPLGVEEEDGSVLKVDATNRSLELRG
SISLPIVVMDPGKCIPVSDNDWNCQVDKLNLKLPSSIDVLGPKQCEALEIDGGLLTDASV
SAGTVPPKEVVAVLRPSNFTRSSASNDLDQKYIVRDNYEMCLDIKFKTEAAKCPKVDHIF
SGTVTNTSRNGRQGLYIFLVGSIPSLFQKAGVYSFSFSLKKSATASSELIVRVKASSNIK
RWELSKDDLKLPLRVSLQNVRITTNKLDNIRPSYEAMLVLSQPHKQPFLSIPCQVFPGPL
RFVNILSSESSKSLLPKQVVEDLKVEVLDRHSNHVQQGIEVELQVHGFSFLDQIGLKRKV
DDHGFIDLSGLLKVTEGFGKLVSLTVICNKNVVANKKFQVEKRELKMVTVVPKLCHLGSK
LKNLAFEVVNSKGDVDHTIHDSYKHGRSDTLRLKTDFPGFDDSLRYAFKLGRCVIPSITL
PLTEGTFCIEANHCQHLELCAKFEIRVSRSTSTEKDTLSDLRASDQLYLKDRSASGSVSD
AIKPVTNRKRSALRDSEVTVPYVEECDFASPLQTQNLEHGDRLPQSSYGKSTSGKLSILI
ESKMQKKQVTVPYVEEECDFASPLQTQNPEHGDCLPQSSDGKSTSGKLSILIESKMQKKQ
ANITQTPDKQPDQKYGLNSDIFNSPEGMMPFADTCTPERAIPSGGPGLEDFESIEEEIYH
YGSAIKDQEEALQWCLLRKDEIEEDLTQLQASMELLPVSQPDCSSQKEVVLGKIEEKVDS
AASIYGIVTRNPLLKNRHPDFIDDVVGLVALLATVSTPALSCSLAEYLGEDQMLAIVCQS
SVALTSPEKYEYILMSLAGELGKCIKNRQLIICLEDLKAYGGDILETDPQRRLALPNPIL
PEGTTPHGFLGYAVNMIDIDVDHLQTRTYAGHGLRETLFYRLFGELQVYDTKEHMKHARG
CITTDGAISLDGLIMRGRGIVSLGSSEKVSVHFPSVSQDSQLVVSSGEVMNEIEKRKSEL
CIVEKAIICESEKRCSYLKLFSEKKAGYLELLENKEREHKVLLSQQLSKKSPIASFKSSL
H
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgattgagaaaaaaagaaaatttcatagtgacaatgaagataaaatttatcgttttcaa
gttttgctgccaaatgggattagtgttaaaatggttaaaagaaacccaaaagatagtagt
atttctttggatgtttttgtggagattgttaaggagaaatgctatgaaattttgaggcaa
acagaggattttaaaaataggaggaagattttctggaattctaaggagttgtacttggaa
gatagtaaagggtttaaaataaggagtttattatgttatgataagttcaagcctaacaaa
actcactacttgagactttttgatggtggtgctaacactgttgatacctttgagaatatg
tgggacttgacaccagatacagatttgttgacagagcttccggaagactatacatttgag
acagccctagcagacttaattgataattctttgcaggcagtgtggtctaatggcgacggc
gaaaggaaactgataagtgttgaggtttacgaggataaaatttctgtatttgatactggc
cctggaatggatggaagtgatgagaattcgattgtgaagtggggaaaaatgggtgcttca
gttcacagaacttccaaaaagcttgcgattggcggaaaacctccatatcttacacctttc
tttgggatgtttggatatggtggaactattgcttctatgcatttagggaggcatgctgta
gtgtctgcaaagactaaacaatccaaaaaagtttactggcttcgtttagagagggatgct
ctactaaggcagtctggctctgatcttaactggaaggcctcgggtggacttcgagatccg
tcagacagagaaattgaattatcccctcatggaagttttacaaagattgttatgaaaccc
aagttagaactccctgatatatttcaactccagtgcaagcttaaggatatatatttccct
tatattcagtgtgatgagatatccaagacagggaggactacaatattggtggattttgag
ataaatggcatcaatttagctgaagttgaaggtggtgaagtcgcagtgacaaatctgcat
tcttctaatggccctgactttgtcctgaatcttcacttttcttttgaagaggataaggct
gcgtctaaatcaccaacaattcgagaagggaatgcacgcctgaagtgcgtttactttccc
aatcttgagggcaaggagagtattgacaaaattttggaaaaacttaattcggatggctgt
agaattcaagaagactatgaatcttttagtcgtatttccatcaggcggttgggccgtctt
cttcctgaagctcgctgggatctgctacctttcatgaaacccagacagaagaaggggagc
aaagttgaaactttgaagaggtgttgtccaagagttaagtgcttcattgatactgatgct
ggtttcaatccaataccatccaagactgatctagcccctcatgatcggtttaccaaagca
ttgaaggatctgggaggtcacactcctcagaaagagaaagtaaaagtccgaatatgtaga
ggcgaaaagcaattgacacttcaacaactggagcaagagtatcaaaactggattctacaa
atgcatagtcagtatgataatgaatacgaaatcaactgtggtgatgaaaaacctgatgtt
cttgttgctgaatcaatcaaagaacttggcataacttgtgatgttgttagggttcttaaa
gctataagttggaagggcagatcttggaataggggacagaaagttaagattctcaaaggt
gcttgttctggctgtcataagaacaacctatttgcaacgctcgaatattttttacttgaa
ggccttgaagaggatacaggaggagaggcgcggatcatttgcaggccactaggggttgag
gaggaagatggtagtgtgcttaaagttgatgctactaacagaagcttggaactccgcggc
tctatatctctgcctattgttgtgatggatccaggaaagtgtattcctgttagcgacaac
gactggaattgccaagttgacaagctaaatctgaaacttccttcgtcaatcgatgtgctg
ggaccaaagcaatgcgaagccttagaaattgatgggggattacttacagatgcttcagtt
tctgctggaacagtacctcctaaagaagttgttgccgtactgcggccttccaatttcact
cgaagtagtgcctctaatgatctagaccaaaaatacattgtaagggacaattacgagatg
tgcctggatattaaatttaagactgaagctgcaaagtgccccaaggtggaccatattttt
tcaggaactgttacaaatacatcacgtaacggacgtcagggtttgtatatatttttggtg
ggctcaatcccaagcttgtttcaaaaagctggggtttattcattctccttctctctgaaa
aaatctgcaactgcaagttctgaattgattgtgagggtgaaagcatcatctaatatcaaa
cgctgggaactctccaaggatgatttaaaactacctttgcgtgtgagtttgcagaatgtg
cggattacaactaataagttagacaatatccgcccaagttatgaagccatgttggtgtta
tctcagcctcataagcaaccctttctcagcataccttgtcaagtgtttcctggacctcta
cgatttgtcaacattctttcatcagaatcaagcaaaagtttacttccgaagcaggtcgtt
gaggatttgaaagtggaggtgttagatagacatagtaatcatgtgcaacaaggcatagaa
gtagagctgcaagttcatggtttttctttcttggatcaaattggtctgaagcgcaaggtt
gatgatcatggtttcattgatcttagcggtcttttgaaagtcacagaaggttttggtaaa
ttagtgtctcttactgttatatgcaacaaaaatgttgtagctaataaaaaatttcaagtc
gaaaagcgggagctgaagatggtgacagtggtacctaagctttgtcatttggggtcgaag
ttgaagaatttagcctttgaagttgttaattctaagggtgatgttgatcacactatacat
gactcatacaagcatggcagatcagatactttaagattaaaaacagactttccaggcttt
gatgattctttaagatatgcttttaagctggggagatgtgtcattccgtcaattactctt
cctttaacagaaggaactttctgcattgaggccaatcattgtcaacacctagagctatgt
gccaagtttgagattagagtatcaagatcaacaagtacggaaaaagataccctttctgat
ctccgggcttcagatcagctgtatttgaaggatagatctgcttccggatcagtttccgat
gctataaagcctgtgacaaacaggaagaggtctgcattgcgagattcagaggttactgtt
ccatatgttgaggagtgtgattttgcatctcccctccaaactcaaaatctggagcatgga
gatcgtctacctcagtcgtcatatggaaaatcaacatctgggaaattgtccattttgatt
gagtcaaaaatgcaaaagaagcaggttactgttccatatgttgaggaggagtgtgatttt
gcatctcccctccaaactcaaaatccggagcatggagattgcctacctcagtcgtcagat
gggaaatcaacatctgggaaactgtccattttgatcgagtcaaaaatgcaaaagaagcag
gctaacattacacaaactccagacaagcagcctgatcaaaagtacgggcttaacagtgac
attttcaattctccagaagggatgatgccttttgctgatacttgtacacctgagcgtgca
ataccttcaggaggacctggcttagaggactttgagagcattgaagaagagatctaccat
tatggttcagctattaaagatcaagaagaggccttacaatggtgtcttctgcgtaaggat
gaaattgaagaggatttgacacagctacaagcttcaatggaactgctgccagtatctcag
ccagattgctcgtctcagaaggaggtggtgctgggaaaaatagaagagaaggttgattca
gcggcttccatttatggcattgttaccaggaatccattattgaagaatcggcaccctgat
ttcattgacgatgtggttggcctagttgcccttcttgcgacagtttccacacccgcgctt
agttgttcattggccgagtacttgggggaagatcaaatgctagccattgtttgtcaatct
agtgttgcactaacaagccctgagaagtacgaatacattctaatgtccttagcaggcgaa
ttgggaaaatgcataaaaaatcgtcaactaattatatgtcttgaagatttaaaagcatat
gggggtgacattctggagactgatcctcaaagaaggctggccttaccaaatcccatctta
cctgagggaacaactccacatggtttcttaggttatgctgttaatatgatcgacattgat
gtggaccatctccaaactaggacatatgcgggtcatggccttcgtgaaacccttttttat
cgactctttggagaacttcaagtgtatgatacgaaagaacacatgaaacatgctcgtgga
tgcataacaacagatggtgcaatatctctggatggactaatcatgagaggaagaggaatt
gtttctctaggatcatctgagaaagtgagcgtgcattttcctagcgtctctcaagatagt
caattggttgtctcttcgggggaggtcatgaacgagatagagaaaaggaaatcggagtta
tgcatagtggagaaagcaatcatttgcgaaagtgaaaaaaggtgttcatacttaaagctc
ttttctgagaagaaggctgggtatctggagttacttgagaacaaagaaagagaacataag
gttttgttatcacaacaattatccaagaaaagtcctattgcttccttcaaaagttcttta
cattag

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