Beta vulgaris (sugar beet): 104890618
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Entry
104890618 CDS
T03548
Symbol
LOC104890618
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04075
Plant hormone signal transduction
bvg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104890618 (LOC104890618)
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104890618 (LOC104890618)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvg03000
]
104890618 (LOC104890618)
Transcription factors [BR:
bvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104890618 (LOC104890618)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
CRE9
Motif
Other DBs
NCBI-GeneID:
104890618
NCBI-ProteinID:
XP_019104507
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All DBs
Position
4:55955766..55960981
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AA seq
683 aa
AA seq
DB search
MPLTELVRMFKGKVEVNQDGVSNSIDPSSRPNTDCVELVWENGQLMMQGKTRKSSNSNNF
QTVGPKLQDGRNVGNFSRMTKFGTMDSLMADYPLSVPSCEMGLDQDVDLVPWLNYPMEEH
LHNDYTSDFLHELSGVTINDLSTENHLPYRERKSTFHGDGHDTSVSLKHGHTSKASSSFE
KDNRGGSSEVPQFMFPFQQSIPRSGISDIIGNSAGNAHHVASRDSANNPSSLSAFTSLRL
QKLDAGQPSTSSGFTNFPYFSRPTGLSRANQVTVNPSKRLENIDKRCTLNSSNPANSTLV
NMDSGYSQKDIVSHNQSIMTPANRDSEALPAKPTQEPRSADQPMDREDIAKNHVSKNQAC
DAPMSKVGTSGDRNMEPVVATSSVCSANSAERTSDEPARNLKRKSHDTTESEGPSEEAEE
ESVGARKAGHGRNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDE
AIEYLKTLQIQVQILSMGAGLYMQPMMLPPGMQPIHGAHMPHFSPMGLGMGMGMGFGMNM
LNMNNGPKMLPFQGPHYPVPGTGFQGMPGSNLPAFPHPGQVLPMSMQQAPIVPPPISGSF
LNMPIGLPASGVAGPSSAPQLAPPGSKKDANPHGLSSMASNNVKSSLNPATIQGSNEGNQ
VCHDQTQAVNAVETASGKDAMHS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcccttaactgaacttgttaggatgtttaaagggaaagtagaagtcaaccaagatgga
gtatccaattctattgatccttcttctagaccgaatactgattgtgttgagctagtttgg
gaaaatggtcagcttatgatgcaaggtaaaactagaaagagttctaattcgaacaatttt
caaacagttggccccaagcttcaagatggtaggaatgttggtaatttttcaagaatgacc
aagtttggcacaatggattctttaatggctgattacccattgtctgttccttcttgtgaa
atgggtttggatcaagatgttgacttggtaccttggttgaactatcccatggaagaacat
ttgcataatgactatacttctgacttcttacatgagttatctggagttaccattaacgat
ctctctacggagaaccatttaccataccgggaaaggaaaagtacttttcatggtgatggc
catgatacttctgtgagtttgaaacatggccatacatctaaggcctcttcaagttttgag
aaggataatagaggtggaagtagtgaggtaccacaatttatgtttccgttccagcaaagt
atacctagatcaggaatctctgatataattggtaacagtgcaggcaatgcccaccatgtt
gcttcgcgagactccgcaaataatccatcttcattgagtgctttcaccagcttgagattg
cagaagctagatgcagggcagcctagcactagctcaggctttacgaattttccatacttt
tctcggcctactggtctttctagagctaatcaggttactgtaaacccctcaaagaggtta
gagaatattgataaaagatgcaccttgaatagtagtaaccctgctaattctactctggtt
aatatggatagtggttattcccaaaaggatatagtttctcacaaccagtccattatgaca
ccagcaaatagagattcagaagctttgcctgcaaagcctactcaggagcctcgttctgct
gatcaacctatggatagagaagacattgctaaaaatcatgtgtcaaagaatcaagcgtgt
gatgcaccaatgagcaaagtgggtactagtggtgataggaatatggagccagtagttgca
acatcttctgtatgttcagctaatagtgcggaaagaacttcagatgagcctgcacgcaat
ctgaaaagaaaatctcatgacactacagaatcagaaggtcctagcgaagaagctgaagag
gaatcagtgggtgcaagaaaagcaggtcatggtcggaatggctcaaagagaagccgagct
gcagaagtgcataatctatctgaaaggagacggagggatagaattaatgagaagatgcgt
gcactgcaagagctcatacccaactgcaacaaggcggacaaagcttcaatgcttgacgag
gctatagaatatttaaagacgctccagattcaagtacagatattgtcgatgggtgccggg
ttgtatatgcagcctatgatgctcccaccaggaatgcaacccatccatggagcccatatg
ccacatttctcacctatggggcttggaatgggtatgggaatgggcttcgggatgaatatg
ctcaacatgaataatggtccgaagatgctaccttttcaaggcccgcattaccctgtacct
ggaaccggatttcaagggatgccgggttctaatcttcctgcttttccgcatcctggtcaa
gtactaccaatgtccatgcaacaagcccctatagttcctcctccaatatcaggaagtttt
ctgaacatgcccataggattgcctgcctcgggcgtagctgggccatcaagtgcaccacaa
ttagctccacctggctctaagaaggatgctaacccacacgggctatctagtatggctagc
aacaacgttaagagctccttgaatccagcaactattcagggatctaatgagggtaatcag
gtgtgccatgatcaaacacaagctgttaatgctgtagaaactgccagtggaaaagatgct
atgcatagctga
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