Beta vulgaris (sugar beet): 104890670
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Entry
104890670 CDS
T03548
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104890670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104890670
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104890670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
AAA_29
AAA_25
AAA_30
Arf
AAA_28
Motif
Other DBs
NCBI-GeneID:
104890670
NCBI-ProteinID:
XP_010674550
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Position
4:complement(9542388..9548633)
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AA seq
331 aa
AA seq
DB search
MADTPTPSPSPTVEINGLAFTYPGIDGHPPPGSTPLIKDFNLSLFAGDRSLLVGANGAGK
TTILKILGGKHMVEPHMVRVLGRSAFHDTNLTSSGDLCYLGGEWKRDVAFAGFEVSIQMD
ISAEKMIFGVGGVDPARRAELIKVLDIDLSWRMHNVSDGQRRRVQICMGLLKPFKVLLLD
EITVDLDVLARADLLKFLKKECEERGATIIYATHIFDGLENWPTHIVYVAQGTLQLATPM
DKLKDISNMSLMRTVESWLRKARDEERERRKERKAKGLPEFEKQVEGSRVVGDPAHAAIR
VINNGWAAGRLHSTLAGEENFTFSSNRVLRQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacaccaacaccatcaccatcaccaacggtcgagatcaacggcctagcattc
acgtacccaggaatcgacggtcacccaccaccggggtccacccctctaattaaagacttc
aacctttccctcttcgccggtgatcgatcccttcttgtgggcgccaatggcgcagggaaa
acgacgatactgaagatattaggtgggaaacatatggttgagcctcacatggttcgggtt
ctcgggcgatccgcttttcatgataccaatttaacttcttcgggtgatttgtgttatctt
ggtggagagtggaagcgagatgttgcttttgctggatttgaggtttctatacagatggat
atttctgctgagaaaatgatatttggagtaggcggtgtagatcctgcaagaagggctgaa
ctaatcaaggtgttggacatcgatctatcttggaggatgcacaatgtatccgatggccag
agaagaagagtgcaaatctgtatgggcctcctgaagccattcaaggttcttctgcttgat
gagatcactgttgaccttgatgtcttggcaagagctgaccttctcaagtttctgaagaag
gaatgtgaagagaggggtgctacaatcatctacgcaacacatatattcgatgggctcgag
aactggccaacacatattgtttacgtagctcagggcacgctacaattagcaacgcccatg
gacaaacttaaggatatatcaaatatgtcactaatgagaacggtggagagttggctgagg
aaagcacgagatgaggagagagaaagaaggaaagaaagaaaagcaaaggggctcccagaa
ttcgagaaacaagttgagggaagcagagtcgtcggtgatcctgctcatgctgctattcgt
gtaattaacaatggatgggctgctggtagactgcattccactcttgctggtgaagagaac
ttcaccttcagctctaacagagtcctaagacaatag
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