KEGG   Beta vulgaris (sugar beet): 104892354
Entry
104892354         CDS       T03548                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104892354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvg03021]
    104892354
Enzymes [BR:bvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104892354
Transcription machinery [BR:bvg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104892354
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 104892354
NCBI-ProteinID: XP_010676559
LinkDB
Position
5:4248921..4273489
AA seq 1444 aa
MDNDISIVNEVPDGILSGVHFNVLTEYDAEKISVLTIETPAGVTDSKLGFPNPTSECATC
GARSNKQCEGHFGVINFPYTIIHPYFVSEVVQILNKICPGCKSIRRERRAKGAKAGAKLD
QLRGCKYCVGRSPSIRFRVSTSDLFRKTAITVELNERPQSKFHIDDFWDFIPKDVQVEES
VNKNKRVLSPAQVHHLIKDVDPSFIKEFVSRTDALFLNCFAVTPNCHRVTELVHPFSTGQ
KLIFDDRTRAFRKLVDFRGAANELASRVLDCLKLSKLRLEKTNNDSDNIDVLNTSASKWM
KEVVLTKRSDHIIRSVVTGDPNLKLSEIGIPCYIAERLQISDPLNSLNWEKLTASCNLRL
LEKGEVYVRRKGNLVPVHEMEEFQFGDRIFRPLNDGDIMLINRPPSIHQHSMFALHVKIL
PINSVVSINPLCCAPLQGDFDGDSLHGYVPQAMEARVELRELVGLDKQLRNGQSGRNLLS
LTHDSLTGAHLLLAEDGALSKPQVQQLEMFCPPKWLSPSTESGLWTGKQLFSMLLPPDFD
YVSPSNGVEISKGELISSPAGSSWFRGDADGNFFESLINHCDGEFLDYLDAAQRFFCEWL
SSRGLSVSLLDLYLCSDGHLRKNLVDEVSCGLQEAEKNCHVKQLLVESYIQYLLDGDEDN
RIAKPLEADKLCCDKQKSAALSIASASAFKFVFRDIQNLTYQYAADDNALLAMIKSGSKG
NLLKVVQQSMCLGLQHSFVPLSFRLPHKISCSAWNELKTKCLKVEENLECTKSFIPSGVV
ESSFVTGLNPLECFVHSVTSRGSSFSENANVPGTLTRKLTFFMRDIQLAYDGTVRNAYGN
QLVQFSYAVEKGNSSICGNDELIGESINACDAVGGRPVGALAACAFSEAAYRALDQPINV
LEPSPLLNFKKVLESGSRKSKGRAISLFLSDKLKRLHYGPEYGALEVKNHLEKLYFSDIV
STIMIVYSPESDNRKHMCPWVCHFHVRKEVVKRMRLKVFSIIDALKRKCETTTSLANVHL
MSKNGCISDAGNDTSIVCITATISESPKKSCTNLDSVREVVIPSLLGSIVKGFAEVEKVD
ILWHDQPVESRFQRVLSGGELYLSVSLSANCKSKNLWHRLMNNCLPIMGLIDWTRSHPDD
LSETFSAYGIDVAWRCFLENLRCAATDMGKTFLPEHLILLADCLSVTGEFVGLSAKGIAR
QKAHVSVSSPFMLACFTNAGASFIKAAKQGAADELQGSLDALAWGKIPCVGTGAQFECLY
SGKGHEIQKPVDIYNLLASQTSSDESTKFKVPPNYQSFMPENYGTRHSNRLPSAKVFNVA
IPKKVLQKYFSVDDIWRLGRMWKKILYKYAIDEKLSDLDKTMLLMALKFHPHRDEKIGNG
AVDIKVGCHSDYKDSRCFLLERDDGTVEDFSYKKCVFGALELISPGRAKLYQNRLAKKGS
TQKL
NT seq 4335 nt   +upstreamnt  +downstreamnt
atggacaatgacatcagtattgtgaatgaagtgccagatgggattctttcaggagttcac
tttaatgtgctgacagaatatgatgcagaaaaaatatctgtactgaccattgaaacacct
gccggggtgactgattcaaagttgggatttccaaatccgacatctgaatgcgccacttgt
ggcgcaagaagcaataagcaatgcgaaggtcattttggtgtaataaattttccgtacacg
ataatccatccatattttgtatctgaagttgtacaaatcttgaacaaaatctgcccagga
tgtaaatccatacggagagaaagacgcgctaagggtgccaaagcaggggctaagcttgat
caattaaggggttgtaaatattgtgtaggaaggtctccatctatcagattcagagtttca
accagtgacttgttcaggaagacggcaattacagtagaacttaatgagaggccacaaagc
aagttccacattgacgatttttgggattttattcctaaagatgtccaagtggaagaaagt
gtgaacaagaacaaaagggttttgtcacctgcacaggtccatcatttgataaaagatgtt
gatccgagcttcataaaagagttcgtttcaagaacagacgcactcttccttaattgcttt
gcagtgacgccaaattgtcatcgtgtcactgagcttgttcatccgttttctactgggcag
aagttaatatttgatgaccgaactagggctttcaggaagcttgttgatttcaggggtgct
gccaatgagttggcatctcgtgtcttagactgcttaaaactttcgaagctccgtctggag
aagacaaataatgattctgataacatagacgtactaaacacttcagcttcgaaatggatg
aaggaagtagttctcacaaagcgcagtgaccacataattcgctccgttgttactggtgat
ccaaatctgaagctctctgagattggcatcccttgttatattgcagaaaggttgcaaatc
tctgatcctcttaattccttgaactgggaaaagttgactgcaagctgcaatttgaggctt
cttgagaagggagaggtctatgttcgcaggaaaggtaacctggttcctgttcatgaaatg
gaggagttccaatttggtgaccgtatatttaggcctttgaatgatggtgatattatgctg
ataaataggcctccttccattcatcaacattcaatgttcgctttgcatgttaaaattctc
ccaataaattctgtagtctctataaatcctttatgttgtgctcccttgcaaggggacttt
gatggtgatagccttcacggctacgtgccacaggcgatggaagctagagttgagcttagg
gagcttgtgggccttgataagcagctaagaaatggacaaagtggaagaaacttgctctca
ctgacacatgacagcttgactggtgcacatttgctcttggcagaggatggtgctctgtcc
aaacctcaagtacagcaactggagatgttttgtcctccgaaatggctttcaccttccact
gaatctggtttgtggactgggaagcaattattcagcatgttattgccacctgattttgat
tatgtctctccttcaaatggtgttgaaattagtaaaggggagttaatatcatctcctgct
ggatcatcttggtttcgcggggatgcagatggaaacttttttgaaagtcttattaaccac
tgcgacggtgaatttttagactatctcgatgctgctcagagatttttttgtgagtggtta
tcatctaggggcttgagtgtctctctgcttgacctttatctgtgttctgatggacacctg
cgtaagaatttggttgatgaagtttcttgtggtcttcaagaagcagagaaaaattgccat
gtgaaacagttactggtcgagtcttacatacaataccttctcgatggtgatgaagacaat
cgaatagctaagccccttgaggctgataagctatgctgtgataaacaaaagtcagctgct
ctaagtattgcttctgccagtgccttcaaatttgtcttccgagatattcagaatttgact
tatcagtatgcagctgatgataatgctttgttggccatgataaaatctggaagcaaaggc
aatctgttgaaagtcgttcagcagagtatgtgtctgggtttacaacattcatttgtacct
ttgtctttcaggcttcctcacaagatttcgtgttctgcttggaatgagttgaaaaccaaa
tgtttaaaagttgaagaaaatcttgaatgcactaaatccttcattccatctggtgtcgtg
gaaagttcatttgtcacaggcttgaatcctcttgaatgttttgttcattctgtaacaagt
cgaggtagttctttcagtgaaaatgctaatgtccctggtaccttaacgcgaaagcttacg
tttttcatgcgtgatatacaactggcctatgatggcaccgtaagaaatgcatatgggaac
caacttgttcagttttcttatgctgttgaaaaagggaactcttctatatgtggcaatgat
gaattaattggtgagagcataaatgcatgtgatgctgttggcggccgccctgttggtgca
ttggctgcttgtgccttttctgaagctgcatacagggcactagaccaacccatcaatgtt
ttggaaccttctcctttattgaactttaagaaagtacttgagagtggttccaggaaaagc
aaaggcagggctatctcactatttctctctgacaaactcaaaaggttgcattacggtcca
gaatatggggccttagaagttaaaaatcatcttgagaagctgtacttttctgatattgtt
tcaacaataatgatagtctattctccggagagcgacaatcggaagcatatgtgcccttgg
gtttgccactttcatgtgagaaaggaggttgtgaagagaatgcggctgaaagtattttct
attattgatgctctcaagaggaagtgtgaaacaactacctcccttgctaatgtgcatcta
atgagcaagaatggttgtatttctgatgctgggaatgatactagtattgtgtgcatcact
gccaccattagtgaaagtccaaagaaatcatgtacaaatttggattcagttcgagaggtg
gtgataccgagccttttgggatccatagtaaaaggatttgctgaggttgagaaggtggat
atattgtggcatgatcaaccagtggaatcaaggtttcagagggttttatctggtggcgaa
ctatatctgagtgtctctctctcagcaaattgtaaaagcaaaaatctgtggcatagatta
atgaacaattgtcttccaatcatgggattgatcgactggacacgcagtcatcctgatgac
ctaagtgagacgttttcagcttatggaattgatgttgcttggagatgcttccttgagaat
ttgaggtgtgcggctactgatatgggcaagacttttcttccagagcacttaatcctactg
gcagattgtctttctgtaacaggtgaatttgtcggattgagtgcaaaagggattgctcgg
caaaaagcccatgtatctgtttcgtcacctttcatgctggcatgctttactaatgcaggc
gcttctttcataaaagctgctaaacagggagctgctgacgagctacaaggaagcctagat
gctttggcatgggggaaaattccttgtgtgggaactggtgcacagtttgagtgtctgtat
tctggcaaggggcacgagatccagaaacctgtggatatatataacctgctagctagccaa
acaagctctgatgagagcactaaattcaaggtgccacctaactatcagtcgttcatgcct
gaaaattatggtactcgtcattcgaatagattgccaagtgcaaaagttttcaatgtggca
ataccaaagaaagttttacagaagtatttctctgtggatgacatttggaggctcggtcgg
atgtggaagaaaatattgtacaagtatgccattgatgagaagttgagtgacttggacaag
acaatgctgttgatggctttgaaattccacccacatcgagatgagaaaattgggaatgga
gctgtagatattaaggttggttgtcactcggattacaaagacagccgttgcttccttttg
gaaagggatgatggaactgttgaagacttctcgtacaagaaatgcgtttttggtgcgctg
gagcttatttcccctggtagggcaaaactttaccagaacagattggccaaaaagggttcc
acgcagaagctctaa

DBGET integrated database retrieval system