Bombus vosnesenskii (yellow-faced bumblebee): 117237207
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Entry
117237207 CDS
T07592
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117237207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvk03400
]
117237207
Enzymes [BR:
bvk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117237207
DNA repair and recombination proteins [BR:
bvk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117237207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
DNA_ligase_IV
BRCT_2
bPH_3
Motif
Other DBs
NCBI-GeneID:
117237207
NCBI-ProteinID:
XP_033356848
UniProt:
A0A6J3KTZ5
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MSKMNGTLASKIEFVELCGIFEKISKTDTRKSRISRKADILEQFFQKCRNMGRELKTEYP
DMDVSLFPILRLILPDLEREREAYNLKEKSLADIYISIFCFGKNSKDAIKLKQYKTPTAK
NITRCNFADKAYWVLQNRFQREGSHISIEQINFILDNLSLRRNETFKDLLRKLNALEFKW
ITRIILKRLDLGIGTKKILQVFHPDADSLFNVSSNLRQICDTLYDPQLRYHHDIQVFSHF
KPMLLEECQIENVEKLFNGRKQYFVQCKYDGERSQIHMKNGKYKYFTRQGYDITNKPGFG
ETTSAGFMSSVFGRLLNPQVKSVILDGELMGWHKERKLLGSKGMNYDVKKLSKDSPYQQC
FVAFDIIMHNDILLNNEPYEKRLEILKDVFKEEEGCLLLCKSTKVSRSEELCKIFNESIR
NKEEGIVVKECDSKYKPNVRNGTNCYKIKAEYSEGLVHDIDLIILGGYYGRKFMGLVNSF
LMGVASSAKTPGENPTKFLSVVSVNSGFSMNTLKELGRMFKDKWQTERPENVVPPKVEPN
LWIRPENSIILTIKASEMICSNNYPTGYSLRFPRVTSVRTDKPWYDVCTTDNLKLLIKDT
QPIQKLTKREIPYEDIEEACESKVRKTRKQRSIKYEEKSMKPNIYDNPPVHLTRLFDDKE
ICVINGVDELPKEQIEEILLQHRANVVQNPLKENYCIIVGNVKTVRASCIIQSKKYDVVT
LDWFRRVTKKENWSSLQDFLPWDLICSRESTKRRLAQYYDDYYDHYTIDADEESLLRSFK
KVEDTEQNVKFDYTEMKKIDQELFDSEISPYSLFRGIVAYFYDSSDLSKFEFRFMGGTIR
ETIDDSVTHIFINNNSTDIELQNLIDNKSQASLTIIKSEWIGECFKQNTIIPYSVYLVQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatgaatggaacattagctagtaaaattgaatttgtggaattgtgcggtata
ttcgagaaaatctctaaaacagatactaggaaatcacgaatatctaggaaagctgatatt
ttggagcagttctttcagaaatgtcgtaatatgggtcgtgaattaaaaactgagtatcca
gatatggatgtttcactctttcctatattaagattaatcttaccagatcttgaacgagaa
cgtgaggcatataatttaaaagaaaagtctcttgctgatatttatattagtatattttgt
ttcgggaaaaacagtaaggatgcaattaaacttaaacagtacaaaactccaactgcaaaa
aatattacacgttgcaattttgcggataaagcttattgggttttacaaaatcgttttcaa
cgtgaaggttctcatatctcaatagaacaaatcaattttattctcgataatctatcgtta
agaagaaatgaaacgttcaaagatttattaaggaaattaaatgcattagagttcaaatgg
ataacacgaattattctaaaaagattggatcttggtattggaacgaaaaagatattgcaa
gtttttcatccagatgcagattcattgtttaatgtatcatctaatttgcgacaaatttgt
gacacattatatgatcctcaattgagatatcatcatgatattcaagttttttctcatttt
aagcctatgttattagaagaatgtcaaattgagaatgtagagaaactttttaatggaaga
aaacaatactttgtgcaatgcaaatatgatggcgagcgatctcaaatacatatgaaaaat
ggcaaatataagtattttacaagacaagggtatgatattacaaataagcctggttttggg
gaaactacttctgcaggttttatgagcagtgtatttggtcgattattaaatcctcaagta
aaatcagtcattttagatggtgaattaatgggttggcataaagaaaggaaattgttaggc
tcaaagggaatgaactatgatgttaagaaactctcaaaggatagtccttatcaacaatgt
tttgttgcattcgatattattatgcataatgatattttacttaataacgaaccttatgaa
aaaagacttgaaattttaaaagatgtatttaaagaggaagaaggttgccttttattatgt
aaatctactaaagtttctagaagcgaggaattatgtaaaatattcaatgaaagtattagg
aataaagaagaaggaattgtagtaaaagaatgtgatagtaaatataaaccaaatgtacga
aatggtactaattgttataaaataaaagctgagtattctgaaggtttggtacacgatata
gatttaattattctcggtggttattacggtagaaaatttatgggtttagtaaatagcttt
ttaatgggcgtagcttcttctgcaaaaactcctggtgaaaatcctacaaaatttttatct
gtagtatcagtcaacagtggtttttctatgaatacattgaaagaactcggaagaatgttt
aaagataagtggcaaacagaacgacctgaaaatgtcgtgcctcccaaggttgagccaaat
ttatggattcgtcctgaaaattccatcattttgaccataaaagcatcggaaatgatatgt
agtaataattatccaaccggatacagtttacgatttcctagagttacaagtgttagaact
gataaaccgtggtatgacgtttgtacaactgataacttgaaattattaattaaggatacg
caaccaattcagaaattaacaaaacgagaaataccttatgaagatatagaagaagcatgt
gaaagtaaagtacgtaagacaaggaaacaacgttcaataaaatatgaagagaaatcaatg
aaaccaaacatttatgacaatccaccggttcatcttacccgactttttgacgacaaagaa
atttgcgtgataaatggcgtcgatgagttacctaaagaacagattgaagaaattcttctg
caacacagagcaaatgttgtacaaaaccctttaaaggaaaattactgtattattgttggt
aacgttaaaacggtaagagcaagttgcatcatacaaagtaaaaagtatgatgtggtaaca
ttggattggtttagacgggttaccaaaaaagaaaattggtcgtcattacaagatttttta
ccatgggatttgatatgtagtcgtgaatcaacgaaacgacgattagcacaatattatgat
gattattatgatcactatactatagatgctgacgaagagagtttattacgttcgttcaaa
aaagtcgaagatacggagcaaaatgttaaatttgattatacagaaatgaaaaaaatagat
caagaattatttgatagtgaaatatcaccttattctctatttcgtggtatcgtggcatat
ttttatgactcatcagatttatcaaaatttgaatttcgttttatgggtggtactattaga
gaaactattgacgattctgtgacacatatttttatcaataataattccaccgatattgaa
ctccaaaatttaattgacaataaatcccaggcatcgttaacaattattaaaagcgaatgg
atcggagagtgctttaaacaaaatacaattattccttattctgtatacctggtccaataa
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