Bartonella vinsonii subsp. berkhoffii: BVwin_00730
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Entry
BVwin_00730 CDS
T02470
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Pathway
bvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVwin_00730 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvn03400
]
BVwin_00730 (nth)
Enzymes [BR:
bvn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BVwin_00730 (nth)
DNA repair and recombination proteins [BR:
bvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BVwin_00730 (nth)
Prokaryotic type
BVwin_00730 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AGF75231
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All DBs
Position
91908..92648
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AA seq
246 aa
AA seq
DB search
MAQRTSKLSKMQKSSEILYSEDEIEEIFRRFSVQRPVPKSDLIYTNVFTLLVAVILSAQA
TDTSVNKATKELFRLADQPEKMVALGEEEIACHIRTIGLWRAKARNVYALCNFLIDQYGG
KVPEKREDLMSLPGVGRKTANVVLNVAFGHPTLAVDTHILRLGNRLGLAPGKTPEIVEEK
LLKIIPIRYLHHAHHWLILHGRYICQARKVQCTQCIIADLCKAAIKTNAIPAPLVEVQGN
GAPIFF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaacaagtaaattgtcaaagatgcaaaaatcttctgaaatattatatagc
gaagacgaaattgaagaaatctttcgccgtttttctgttcaacgcccagttcctaagagt
gatcttatctataccaatgtttttactcttttggttgcggttattctttcggctcaagcg
acagatacgagtgttaataaagcaactaaagaattatttcgccttgctgatcagccggaa
aaaatggttgcattaggagaagaagaaattgcatgccatattcgtacaattggtctttgg
cgcgcaaaagcgcgtaatgtttatgcactttgcaattttttaattgaccaatatggcggt
aaagtgcctgaaaaacgtgaagatcttatgtccctccctggagtggggcgaaaaacggcg
aatgttgttttgaatgttgcttttggtcatccaacattagcggtagatacgcatattctg
cgtcttggaaaccgtcttggtttagcacctggcaaaacaccagagattgttgaagaaaaa
ttattaaagattatccctatacgttatctgcatcatgcgcatcattggcttattttacat
gggcgttatatttgtcaagcgcgtaaagtacaatgtacacaatgcattattgctgatctg
tgtaaagcagcaatcaaaacaaacgcaattccagcacctttggttgaagttcaaggaaat
ggtgctcccatttttttttga
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