Bremerella volcania: Pan97_34100
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Entry
Pan97_34100 CDS
T06456
Symbol
pdg_2
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bvo
Bremerella volcania
Pathway
bvo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan97_34100 (pdg_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvo03400
]
Pan97_34100 (pdg_2)
Enzymes [BR:
bvo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pan97_34100 (pdg_2)
DNA repair and recombination proteins [BR:
bvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pan97_34100 (pdg_2)
Prokaryotic type
Pan97_34100 (pdg_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
ARF7EP_C
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QDU76362
UniProt:
A0A518CAV4
LinkDB
All DBs
Position
complement(4186307..4186957)
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AA seq
216 aa
AA seq
DB search
MIQDLQERKAQARRVVRQLKKDYAGAECALNYETPFQLLIATILSAQCTDVRVNIVTKEL
FAKYPDADTMSRAPVKTLENMVKTTGFFRNKAKNIHAASQAIADEFDGEVPQDLATLVAL
PGVGRKTANVVLGTAFGIPSGIVVDTHVGRLTWRMGLADKGDAVKVERELMEVVPKKEWI
DFSHRLIHHGRAVCAARKPKCEGCHFLKFCPQIGVK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagacctccaagagcgtaaagctcaggcccgtcgagtcgtccgacagttgaaa
aaggactacgccggtgctgagtgcgcgttgaattacgagaccccctttcaactgttgatc
gccacgattctatcggctcagtgtaccgatgtgcgggtcaacatcgtgacgaaggagttg
tttgccaagtatcccgatgccgacaccatgtcgcgggcaccggttaagacgttggagaac
atggtcaagacgacagggttcttccggaacaaggccaagaatatccacgccgcatcccag
gcgattgccgacgagttcgacggtgaggtgccgcaggatttagcaaccttggttgccttg
ccgggcgtcggtcgcaaaacggcaaatgtcgtgctggggaccgcgttcggaattccttct
ggcattgtggtcgatacccatgtcggccggttaacctggcggatgggcctggccgacaag
ggggacgcagtcaaggtcgaacgcgagctgatggaggtcgtccccaagaaagagtggatc
gatttctcgcatcggctgatccaccacggccgggcagtctgtgcggccagaaagcccaag
tgcgaaggatgccatttcctgaagttctgtccacagattggcgtaaagtaa
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