Borreliella valaisiana: P613_02795
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Entry
P613_02795 CDS
T03221
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bvt
Borreliella valaisiana
Pathway
bvt03030
DNA replication
bvt03410
Base excision repair
bvt03420
Nucleotide excision repair
bvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P613_02795 (ligA)
03410 Base excision repair
P613_02795 (ligA)
03420 Nucleotide excision repair
P613_02795 (ligA)
03430 Mismatch repair
P613_02795 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvt03032
]
P613_02795 (ligA)
03400 DNA repair and recombination proteins [BR:
bvt03400
]
P613_02795 (ligA)
Enzymes [BR:
bvt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
P613_02795 (ligA)
DNA replication proteins [BR:
bvt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P613_02795 (ligA)
DNA repair and recombination proteins [BR:
bvt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
P613_02795 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P613_02795 (ligA)
MMR (mismatch excision repair)
DNA ligase
P613_02795 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P613_02795 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_5
HHH_2
DNA_ligase_ZBD
DUF4796_N
U3_assoc_6
GerPB
CEBP_ZZ
Motif
Other DBs
NCBI-ProteinID:
AIJ29902
LinkDB
All DBs
Position
562291..564273
Genome browser
AA seq
660 aa
AA seq
DB search
MSSKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFIYDKHILRLQELESKYPEYKTLDSPT
LKFGSDLLNDFKEVEHSVPILSLDKVYDLNLLKTWIDKIDFNDSFNISVEPKIDGCSIVL
YYKGGILEKALTRGNGKFGNDVTKNVKTIRYIPLFLDEEVDLVLRGEVYITKENFFKINK
FLEKPYSNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLEFKTNNLATARLKKLGFK
VNPLIRFFDQKSSIKEVLSYIADITKKRNSFEYEIDGVVLKVSDFSLRERLGYTSHHPKW
AMAYKFEALSGFSRVNSIVVQVGRSGKITPVANIDKVFVSGAFITNATLHNQDYIMSIDL
NVGDVVKVSRRGDVIPAVEMVINKFSTGFFKIPENCPACKTVLVKEGAHFFCTNNNCPSV
VVERIKYFCSKNCMDIEGFSDKIISFLFEKKFISSEIDLYIFNFCKLFEFKGFKGKRVSN
LINSIEASKKKPFSKLLLSMGIKELGENTIRLLFLNNLNSFSKLFSLCQDKDFAFSTLLK
IKGIGEKIALNIIEAFNDSIMINKFKFFENLEFKMEECIVIDGESRLLADKKFCITGTFY
GYSRPIIIDKLKNKGAIFKACVTKDLDFLVAGEKAGSKLKKALNLNIKIMSFEDIKSYLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaaagtacagcaagaaattgcagacttgaagaagttaatcagaaagtgggat
aaagagtactatgttgattctttgcctagcgttgaggattttatatatgataagcatatt
ttaaggcttcaagagttagaaagtaaatatcccgaatacaagaccctagattctcctact
cttaaatttggcagtgatcttttaaatgactttaaagaggttgaacattctgttcctata
ttaagtcttgataaagtttatgatcttaatttgctcaaaacatggatagataagattgat
tttaacgattcttttaatatttctgttgagccaaagattgatggatgttcgattgttctt
tattataaaggtggtattcttgaaaaagctcttactaggggtaatggaaaatttggtaat
gatgttactaaaaacgttaaaaccattaggtatattcctttatttcttgatgaagaggtt
gatttagtattaaggggagaagtttatattactaaagaaaatttttttaaaataaataag
tttttggaaaagccttatagtaattctagaaatttagcttcgggaatacttagaagggtt
gatagcagagaagttgctaatttccctttaaatattttcatttatgattttttaaatgcc
ggattggaatttaaaactaataatttagctactgcaagacttaaaaaattgggttttaag
gttaatcctttgattaggttttttgatcaaaaaagttcaatcaaagaagttttaagttat
atagcagatataacaaaaaaaagaaattcttttgagtatgaaatagatggagttgttctt
aaggttagcgatttttcgctaagagaaagattgggatatacttcacatcatcctaaatgg
gcaatggcttacaaatttgaagcgctttcgggttttagcagggtaaatagtattgttgtt
caggttgggcgtagtggtaaaattactccggttgccaatattgataaagtttttgtttca
ggggcttttattactaatgcaacattgcacaatcaagattatataatgtcgattgatttg
aatgttggtgatgttgttaaagtttcaagaaggggagatgtaattcctgctgttgaaatg
gtgataaataaattttcaacaggattttttaaaattcctgaaaattgtccagcttgtaaa
acggttttagtaaaagaaggagcgcattttttttgtacaaataataattgtccttcagta
gtagttgagagaataaaatatttttgtagtaaaaattgcatggatattgaagggttttct
gataagatcatttcttttctttttgaaaaaaagtttatttcttcagaaattgatctttat
atatttaatttttgtaaactttttgaatttaaggggtttaaaggtaaaagggtaagtaat
ttaataaattcaattgaagctagcaaaaagaaaccatttagcaaattacttcttagcatg
ggaattaaagaattgggagaaaacacaataaggttattgtttcttaataatttaaattca
ttttcaaaactttttagtctttgtcaagataaggattttgctttttcaacactgttgaaa
attaaagggataggagagaaaattgctttaaatattattgaagcttttaatgattcaata
atgattaataagtttaaattttttgaaaatttggaatttaaaatggaagagtgtattgtg
attgatggtgaaagtaggttattagctgataaaaagttttgtattactggaactttttat
ggttattctaggcccattattattgataagttaaaaaataaaggagcaatttttaaagct
tgtgtaactaaagacttagattttcttgttgcaggagaaaaagctggatcaaaacttaaa
aaagctttgaatttaaatataaaaattatgtcttttgaggacataaaaagttacttggat
taa
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