Brachymonas wangyanguii: ACI3EV_07000
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Entry
ACI3EV_07000 CDS
T11206
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bwn Brachymonas wangyanguii
Pathway
bwn03030
DNA replication
bwn03410
Base excision repair
bwn03420
Nucleotide excision repair
bwn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bwn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACI3EV_07000 (ligA)
03410 Base excision repair
ACI3EV_07000 (ligA)
03420 Nucleotide excision repair
ACI3EV_07000 (ligA)
03430 Mismatch repair
ACI3EV_07000 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwn03032
]
ACI3EV_07000 (ligA)
03400 DNA repair and recombination proteins [BR:
bwn03400
]
ACI3EV_07000 (ligA)
Enzymes [BR:
bwn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACI3EV_07000 (ligA)
DNA replication proteins [BR:
bwn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACI3EV_07000 (ligA)
DNA repair and recombination proteins [BR:
bwn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACI3EV_07000 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACI3EV_07000 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACI3EV_07000 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACI3EV_07000 (ligA)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
XKQ52049
LinkDB
All DBs
Position
complement(1444724..1446823)
Genome browser
AA seq
699 aa
AA seq
DB search
MSTPDLFAAQPDPLQPARERAAVLRAQLHHNAYLYYTLDAPELPDAEYDRLFQELQALEQ
QHPELLTADSPTQRVLGQLLPGFATVRHAVPMLSIRTETDTEASGVITFDTRVRKELGLT
PEEPPIEYAAELKFDGLAVNLRYEQGVLVQAATRGDGERGEDITQNVRTIRQIPLRLRGD
ALPAVLEVRGEVYMRRDAFEALNERQRDKIAQGAKNEKTFVNPRNAAAGSLRQLDPAITV
QRPLSFYAYAWGEVQGWDAMPDSHSGVLDALDAFGLPVSKERVVSQGPQGLIAFHQQIAE
RRDQLPFDIDGVVYKVNRIALQRQLGFVSREPRWAVAHKYPAQEMLTVVRGIDVQVGRTG
KLTPVAKLEPVFVGGVTVTNATLHNQEEANRKDVRIGDTVVVRRAGDVIPEVVSVVLEQR
PEGTVPFAMPDACPVCGSAVAREKGEVDTRCTAGIYCSAQRKQAVLHFAQRRALDIEGLG
DKLVEQLVDGEIIRSLPDLYTLQLETLSGLDRMGEKSAQNLLDALDKSKSTTLARFVYGL
GIRHVGETTAKDLACHFGSLDALLQADEAALLQVPDVGPVVADSLLRFMAEPHNREVLER
LRALGLHWPESEGQAAALESASPLAGKIFVLTGTLPDMGRDEAKELLEAAGAKVTGSVSK
KTDYLVAGAEAGSKLEKAQSLGITVLDQQGMLDLLAQQG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcctgacctgtttgccgcgcagcccgatccgctgcagccggcgcgtgaacgt
gccgccgtgctgcgggcgcagctgcaccacaacgcctacctctactacacgctggacgcg
cccgagctgcccgatgccgaatacgaccggctgttccaggagctgcaggcgctggagcag
cagcacccggaactgctgaccgccgattcaccgacgcagcgcgtgctgggccagctgctg
ccgggctttgccacggtgcggcatgcggtgccgatgctgtcgatccgcaccgagaccgat
accgaggccagcggcgtgatcaccttcgacacgcgcgtgcgcaaggagctgggcctgacg
ccggaagaaccgccgatcgaatatgccgccgagctcaagtttgacggtctggccgtgaac
ctgcgctacgagcagggcgtgctggtgcaggctgccacgcgcggcgatggtgagcgcggc
gaggacatcacgcaaaacgtgcgcacgattcggcagattccgctgcgcctgcgtggcgac
gcgctgccggccgtgctggaagtgcgcggcgaggtctatatgcggcgcgatgccttcgag
gcactgaacgagcgccagcgcgacaagattgcccagggcgcgaagaacgaaaaaaccttt
gtcaacccgcgcaacgccgccgccggttcgctgcgccagctcgatccggccatcacggtg
cagcgcccgctgagtttctatgcctacgcctggggcgaggtacagggctgggacgccatg
cccgacagccacagcggcgtgctggatgcactcgacgccttcggcctgccggtgtcgaaa
gaacgcgtggtgagccagggcccgcaaggcctgattgcctttcaccagcagattgccgaa
cggcgtgaccagctgcccttcgatatcgatggcgtggtctacaaggtcaaccgcatcgcg
ctgcagcgccagctcggctttgtcagccgcgagccgcgctgggcggtggcgcacaagtac
ccggcgcaggaaatgctgaccgtggtgcgcggcatcgacgtgcaggtcggccgtaccggc
aagctcacaccggtggccaagctggagccggtgtttgtgggtggcgtgaccgtgaccaat
gccacgctgcacaaccaggaagaggcgaaccgcaaggatgtgcgcattggcgataccgtg
gtggtgcgccgtgccggcgacgtgatccccgaagtggtatcggtggtgcttgagcagcgc
cctgaaggcacggtgccgtttgccatgcccgatgcctgcccggtctgcggcagtgccgtg
gcacgggaaaaaggcgaggtcgatacccgctgcaccgccggcatctattgcagcgcgcag
cgcaagcaggccgtgttgcactttgcccagcgccgcgcgctggacatcgagggcctgggt
gacaagctggtggagcagctggtggacggcgagatcatccgcagcctgcccgatttgtac
acgctgcaactggagaccctgtccgggttggaccgcatgggcgaaaaatccgcgcaaaac
ctgctggatgcgctggacaagagcaagtcgaccacgctggcacgctttgtctacggcctg
ggcatacgccatgtgggcgaaaccacggccaaggatctggcgtgccactttggcagcctt
gatgccttgctgcaggccgatgaggccgcgctgctgcaggtgcctgatgtcggcccggtg
gtggccgacagcctgctgcgcttcatggccgaaccgcacaaccgtgaggtgctggagcgc
ctgcgtgcgctgggcctgcactggccggaatcggaaggccaggctgctgccctggaaagc
gccagcccgctggccggcaagatctttgtgctgactggcacgctgcccgacatgggccgt
gacgaggccaaagaactgctggaagccgccggcgccaaggtcaccggcagcgtgagcaag
aagaccgattacctggtcgccggtgccgaagctggcagcaagctggaaaaggcgcaatcg
ctcgggatcacggtgctggaccagcagggcatgctggatctgctggcgcaacagggctga
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