KEGG   Bacillus mycoides WSBC 10204: bwei_3362
Entry
bwei_3362         CDS       T03453                                 
Symbol
hfq1
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bww  Bacillus mycoides WSBC 10204
Pathway
bww02024  Quorum sensing
bww03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bww00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    bwei_3362 (hfq1)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    bwei_3362 (hfq1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bww03019]
    bwei_3362 (hfq1)
   03036 Chromosome and associated proteins [BR:bww03036]
    bwei_3362 (hfq1)
Messenger RNA biogenesis [BR:bww03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     bwei_3362 (hfq1)
Chromosome and associated proteins [BR:bww03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    bwei_3362 (hfq1)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AIW85978
UniProt: A0A084J5Y5
LinkDB
Position
complement(3197774..3197962)
AA seq 62 aa
MEHLQEELYKQIKEEKGAVTIFLKSGVRIVGEVVGVDRFTVLILVDGKQQLIYKQAISTI
MK
NT seq 189 nt   +upstreamnt  +downstreamnt
ttggaacatttacaagaagagttgtataaacaaataaaagaagaaaaaggtgcagttact
atatttttaaagagcggagtaagaatagtaggggaagtagttggagtagatagatttaca
gtattaatattagtagatggaaaacaacaacttatttataagcaggcaatatcaacaatt
atgaaataa

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