Bacillus mycoides WSBC 10204: bwei_4669
Help
Entry
bwei_4669 CDS
T03453
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bww
Bacillus mycoides WSBC 10204
Pathway
bww03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bwei_4669 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bww03019
]
bwei_4669 (rnr)
03016 Transfer RNA biogenesis [BR:
bww03016
]
bwei_4669 (rnr)
Enzymes [BR:
bww01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
bwei_4669 (rnr)
Messenger RNA biogenesis [BR:
bww03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bwei_4669 (rnr)
Transfer RNA biogenesis [BR:
bww03016
]
Prokaryotic type
tRNA degradation factors
bwei_4669 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
S1_RRP5
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
AIW87257
UniProt:
A0A0A0WYF9
LinkDB
All DBs
Position
4432014..4434452
Genome browser
AA seq
812 aa
AA seq
DB search
MEEIMQEHIDKLLLFMREEAYKPLTIQELESAFGIEGSEGFKDFVKALVMMEEKGLVIRT
RSNRYGLPEKMNLVRGKLIGHARGFAFVVPEEKKTGDDDLFIPPTELNGALHGDTVLARV
SAQSSGSRQEGAIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFILKSASMGAVE
GHKVVVKITGYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDIKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEALIERYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEIHPRALQQILEMVQGQPEEIVISTVMLRSMKQA
RYDSNSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWRENLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEKHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKFDRSGQGKGKASASASTSASQP
GKKDGNSNGNGKKKKGFFENVPGFKKKKKKRK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatgcaagaacatattgataagttgttattatttatgagggaagaagcg
tataaaccgttaacgatacaagaattagaatcggcatttggaatcgaaggctctgagggc
tttaaagatttcgtaaaggcacttgtaatgatggaagagaaggggcttgttatccgcaca
cgtagtaaccgctacggtcttccagaaaaaatgaatttagtacgcggtaaattaattggg
cacgcacgtggttttgcgttcgtcgttccagaagagaagaaaacaggagatgatgatctt
ttcatcccgccgacagaattaaatggtgcacttcatggtgatacagtattagcacgtgtt
agcgcacaatcaagtggatcacgccaagaaggcgcgattgttcgtattttagagcgtgga
acgaaggaactagttggtacatatacagagtcaaagaactttggatttgttatacctgat
aataaacgctggacaagtgatatttttatcttgaaaagtgcatctatgggcgctgtagaa
ggccataaagtagttgtgaaaattacgggctacccagagaaccgtttaagcgcagaaggt
gaagttattcaaattctaggtcataaaaatgacccaggagtagatattttatctgtcatt
cataaacatcatttacctttagcattccctgaagaagtgatggagcatgcaaacagtgta
ccagaaacgatttcagaagaagatataaaagatcgtcgtgatttacgtgatcaaatgatt
gttacaattgatggtgcggatgcgaaagacttagatgacgctgttacagtaacgaagctt
gagaacggtaactataagcttggcgttcatattgcggatgtaagtcattacgttcaagaa
ggttctccaattgatgttgaagcagcagagagagcaacgagtgtatatcttgtagaccgt
gtaattccgatgattccgcatcgtttatcaaacggtatttgttcattaaatccgaaagta
gaccgtctgacactatcttgtgaaatggaaatcaacaatctaggtgatgttgtaaaacac
gagattttccaaagtgtaattaaaacgacagagcgtatgacgtatgctgatgtaagaagc
attttagaagatgaagacgaagcactaattgaacgttacgagccgctagtaccaatgttt
aaagaaatggggcagttagcacaaattttacgtgaaaaacgtatgcgccgtggtgcgatt
gactttgactttaaagaagcgaaagtactagtagatgaagaaggaaaaccgactgatgtt
gtaatgcgtgatcgttctgtatcagagaagttaattgaagagtttatgcttgttgcgaac
gaaacagtagcggagcatttccactggatgaacgtaccgtttatgtaccgtgtccatgaa
gatccgaaagaagataagcttgagcgtttcttcgagtttgtaacaaacttcggatatgca
gtaaagggacgtgcgaatgaaatacaccctcgtgcattgcagcaaattcttgaaatggtt
caaggtcagccggaagaaatagtcatttcaacagttatgcttcgttctatgaagcaagca
cgttacgattcgaacagcttaggacattttggtttatcaactgagttctacacgcatttc
acatcgccaattcgtcgttacccagatacgattgttcatagattgattcgtgaatacatc
attaatggtaaagtagacaacgaaacgcaagcgaaatggcgtgaaaacttacctgagatt
gcagagcactcttctaatatggaacgccgtgctgttgaagcagagcgtgaaacagacgaa
atgaaaaaagcagagtatatggtcgataagatcggtgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacac
gttagctatttaacagatgattactaccgttatgatgaaaaacattttgcgatgattgga
gaacgtacaggtaatgtattccgcatcggtgacgaaattacaattcgtgttattaacgta
aataaagacgagcgcgcaatcgactttgaaatcgttggcatgaaaggcacacctcgtcgt
aagttcaaagatcgtccagttgtgattgaacagccaagaacaggcagaaagaaacgcggt
ggacgtagcgaacgtagtaatgagcgcggtggtgaacgcggcacaggaagaaagtttgat
cgtagtggacaaggtaaaggaaaagcatctgcatctgcatccacatccgctagtcagcca
gggaaaaaagatggtaatagtaatggtaatggtaagaagaaaaaaggattctttgaaaat
gtaccaggattcaagaagaaaaagaaaaagcgcaagtaa
DBGET
integrated database retrieval system
