Bacillus mycoides WSBC 10204: bwei_5004
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Entry
bwei_5004 CDS
T03453
Name
(GenBank) helix-turn-helix family protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bww
Bacillus mycoides WSBC 10204
Pathway
bww02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bww00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
bwei_5004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bww03000
]
bwei_5004
Transcription factors [BR:
bww03000
]
Prokaryotic type
Helix-turn-helix
Other families
bwei_5004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_1
TPR_2
TPR_8
TPR_10
CFAP70_TPR_C
TPR_16
TPR_19
HTH_31
TPR_6
RapH_N
ScpA_C
TPR_7
Colipase-like
DUF4807
DUF2225
Motif
Other DBs
NCBI-ProteinID:
AIW87589
LinkDB
All DBs
Position
complement(4752530..4753801)
Genome browser
AA seq
423 aa
AA seq
DB search
MQQTLEKIGKQVFYKRLQQKMTQEELCQGICSVSYLSKIENGKIEASEEILQLLCTRLEI
AVTDLRDVEEDVKVKLDEWLNALVHLDKQQVERIYEELQGEMKHVLDFEIINYYKLLYTR
YLIMKRDFPAVEEELESLKKMYKKYSPFQKLLYTYSKGLYYFLQHKYKTALEYLARTEVM
AKEQGYHENGIYFNLALVYNELEVEHMTLHFANVAMEGFKNEYKFRYVINCQLLIALSYI
QKRQYDEALSIYNNILREANSFADKESITAIALNNLGFLYYNLKDYAKAKDYYLQCLKYK
KEEDLNYIDAVYEIALQCIELKEFEEAKEWISKGVDVAKRDEKYKSMLYILLVLKHKYFE
TKDVYKKFLEVEAIPFYRSEENKKELKMVYLELAAYHEELLEFRESNNYYKLAINLLEEK
GGK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaacattagaaaaaataggcaagcaagttttttataaacggctacagcaaaaa
atgacacaagaagaattatgtcagggcatttgttctgtctcatacttaagtaagatcgaa
aatggaaagattgaagcatcagaagaaattctacaattgctctgcacaagactagaaatt
gctgtgacggatttgagagatgtagaagaagatgtgaaagtgaagttggacgagtggttg
aatgcattagttcatttggacaagcaacaagtagagcgcatatacgaagagttgcaaggt
gaaatgaagcatgtgttggattttgaaattataaattattataaactgctgtatacacgt
tatttaattatgaaaagggattttcctgctgtcgaagaagagttagagagcttaaagaag
atgtataaaaagtattcaccattccagaaattattatatacgtatagcaagggattatat
tatttcttacaacataaatataagacggcattggagtacttggctcgaacagaagtaatg
gcgaaggagcaagggtatcacgaaaatggaatatactttaatttagctcttgtttacaat
gaattagaagttgaacatatgactttacattttgctaatgtagcaatggaaggatttaag
aatgaatataagtttcggtatgtaataaattgtcaattacttattgcgttgagttacata
cagaaaaggcaatatgatgaagcgctttctatttataataatattttgagagaggcgaat
tcttttgctgataaagaaagcataacagctattgctttaaataacttaggatttttgtac
tataacttaaaagattatgcaaaggctaaagattattatttgcaatgcttaaagtataag
aaggaagaggatttaaattatattgatgcagtatatgagattgctttacagtgtatagaa
ttaaaagaatttgaagaagcaaaagagtggatcagtaaaggggtagatgtcgcgaagagg
gatgaaaagtataaaagtatgctatatatacttttagtgcttaagcataaatactttgaa
actaaagatgtttataaaaaatttttagaagttgaggcgatcccattttatagaagtgaa
gagaataaaaaggaattaaaaatggtgtatttagaactagcagcgtatcatgaagaacta
ttagagtttcgagaaagtaataactattataaattagcaattaatttattggaagaaaag
ggaggaaaataa
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