Bacillus mycoides WSBC 10204: bwei_5496
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Entry
bwei_5496 CDS
T03453
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bww
Bacillus mycoides WSBC 10204
Pathway
bww03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bwei_5496 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bww03019
]
bwei_5496 (cshA)
03009 Ribosome biogenesis [BR:
bww03009
]
bwei_5496 (cshA)
Enzymes [BR:
bww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bwei_5496 (cshA)
Messenger RNA biogenesis [BR:
bww03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bwei_5496 (cshA)
Ribosome biogenesis [BR:
bww03009
]
Prokaryotic type
rRNA helicases
bwei_5496 (cshA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
NAT10_TcmA_helicase
DD_DDX21-DDX50
Motif
Other DBs
NCBI-ProteinID:
AIW88016
UniProt:
A0A0A0WU80
LinkDB
All DBs
Position
complement(5261564..5263180)
Genome browser
AA seq
538 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTNKDAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIIFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGAIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMEAPTLDEALEGQQRLIAEKLQSTIENDNLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGGGSKKRGGNGSGYRDGNRNRSRDGRGGGDGRNRDR
NRDGRGSGSGDGRNRDRNRDGGSRDAGSRDGNRGRKGEGRPGSSNGRGERKHHSRPQA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgagtctttactacaatctgttgaaagtatg
ggttttgaagaggctacgccgattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacaaataaagatgcagttcaaggtattgttatcgcgccaacgcgc
gaattagcaattcaagttggagaagagctatacaaacttggtaaacataaacgtgttcgt
attctaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcctgcaaaacgtagagacagttgttcttgacgaagcagatgaaatgttaaacatgggc
ttcattgaagatattgaagcgattttaacagatgtaccagaaacacatcaaacattatta
ttctcagcgacaatgccagacccaatccgtcgcattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcaatcatattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcatggtgacttaacacaagcaaaacgtatg
tctgtattacgtaaatttaaagaaggtgctatcgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccgcaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgccggtaaaaaaggtattgca
atgttatttgtaacgccacgtgaatcaggacaattgaaaaatatcgagcgtacaacaaaa
cgtaaggttgatcgtatggaagcaccgacacttgacgaggcactagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaattgaaaatgataacttatcatactataagcgt
attgcagaagaaatgttagaagagaatgattctgtaacagtagtagctgctgctttaaaa
atgatgacaaaagagccggatacaactccgatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggtggcggttctaaaaaacgcggtggtaacggaagtggataccgtgat
ggtaaccgtaatcgtagtcgtgatggacgcggcggtggcgatggtcgtaaccgtgatcgc
aatcgtgatggacgtggaagcggaagtggcgatggtcgtaaccgtgatcgtaatcgtgat
ggcggtagccgtgatgctggtagccgtgatggcaaccgtggtcgtaaaggtgaaggtcgc
cctggatcttcaaatggacgcggcgaaagaaaacatcatagccgtccacaagcttaa
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